The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
Non-parametric clustering of joint pattern multi-genetic/epigenetic factors. This package contains functions designed to cluster subjects based on gene features including single nucleotide polymorphisms (SNPs), DNA methylation (CPG), gene expression (GE), and covariate data. The novel concept follows the general K-means (Hartigan and Wong (1979) <doi:10.2307/2346830> framework but uses weighted Euclidean distances across the gene features to cluster subjects. This approach is unique in that it attempts to capture all pairwise interactions in an effort to cluster based on their complex biological interactions.
| Version: | 2.0.0 |
| Imports: | Runuran, graphics, stats, utils |
| Published: | 2023-08-15 |
| DOI: | 10.32614/CRAN.package.RHclust |
| Author: | Joseph Handwerker [aut, cre], Lauren Sobral [ctb], Meredith Ray [aut, ctb] |
| Maintainer: | Joseph Handwerker <jkhndwrk at memphis.edu> |
| License: | Artistic-2.0 |
| NeedsCompilation: | no |
| In views: | Omics |
| CRAN checks: | RHclust results |
| Reference manual: | RHclust.pdf |
| Package source: | RHclust_2.0.0.tar.gz |
| Windows binaries: | r-devel: RHclust_2.0.0.zip, r-release: RHclust_2.0.0.zip, r-oldrel: RHclust_2.0.0.zip |
| macOS binaries: | r-release (arm64): RHclust_2.0.0.tgz, r-oldrel (arm64): RHclust_2.0.0.tgz, r-release (x86_64): RHclust_2.0.0.tgz, r-oldrel (x86_64): RHclust_2.0.0.tgz |
| Old sources: | RHclust archive |
Please use the canonical form https://CRAN.R-project.org/package=RHclust to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.