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Performs genome-wide association studies (GWAS) on individuals that are both related and have repeated measurements. For each Single Nucleotide Polymorphism (SNP), it computes score statistic based p-values for a linear mixed model including random polygenic effects and a random effect for repeated measurements. The computed p-values can be visualized in a Manhattan plot. For more details see Ronnegard et al. (2016) <doi:10.1111/2041-210X.12535> and for more examples see <https://github.com/larsronn/RepeatABEL_Tutorials>.
| Version: | 2.0 |
| Depends: | hglm, methods |
| Published: | 2026-01-06 |
| DOI: | 10.32614/CRAN.package.RepeatABEL |
| Author: | Lars Ronnegard [aut, cre] |
| Maintainer: | Lars Ronnegard <lars.ronnegard at slu.se> |
| License: | GPL-2 | GPL-3 [expanded from: GPL] |
| NeedsCompilation: | no |
| Citation: | RepeatABEL citation info |
| Materials: | NEWS |
| CRAN checks: | RepeatABEL results |
| Reference manual: | RepeatABEL.html , RepeatABEL.pdf |
| Package source: | RepeatABEL_2.0.tar.gz |
| Windows binaries: | r-devel: RepeatABEL_2.0.zip, r-release: RepeatABEL_2.0.zip, r-oldrel: RepeatABEL_2.0.zip |
| macOS binaries: | r-release (arm64): RepeatABEL_2.0.tgz, r-oldrel (arm64): RepeatABEL_2.0.tgz, r-release (x86_64): RepeatABEL_2.0.tgz, r-oldrel (x86_64): RepeatABEL_2.0.tgz |
| Old sources: | RepeatABEL archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.