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SNVLFDR: Empirical Bayes Single Nucleotide Variant Calling

Identifies single nucleotide variants in next-generation sequencing data by estimating their local false discovery rates. For more details, see Karimnezhad, A. and Perkins, T. J. (2024) <doi:10.1038/s41598-024-51958-z>.

Version: 1.0.1
Published: 2024-01-25
DOI: 10.32614/CRAN.package.SNVLFDR
Author: Ali Karimnezhad [aut, cre, ctb]
Maintainer: Ali Karimnezhad <ali.karimnezhad at gmail.com>
License: GPL (≥ 3)
NeedsCompilation: no
Materials: README
CRAN checks: SNVLFDR results

Documentation:

Reference manual: SNVLFDR.pdf

Downloads:

Package source: SNVLFDR_1.0.1.tar.gz
Windows binaries: r-devel: SNVLFDR_1.0.1.zip, r-release: SNVLFDR_1.0.1.zip, r-oldrel: SNVLFDR_1.0.1.zip
macOS binaries: r-release (arm64): SNVLFDR_1.0.1.tgz, r-oldrel (arm64): SNVLFDR_1.0.1.tgz, r-release (x86_64): SNVLFDR_1.0.1.tgz, r-oldrel (x86_64): SNVLFDR_1.0.1.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.