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Software that leverages the capabilities of Circos by manipulating data, preparing configuration files, and running the Perl-native Circos directly from the R environment with minimal user intervention. Circos is a novel software that addresses the challenges in visualizing genetic data by creating circular ideograms composed of tracks of heatmaps, scatter plots, line plots, histograms, links between common markers, glyphs, text, and etc. Please see <http://www.circos.ca>.
| Version: | 1.0 |
| Depends: | R (≥ 2.14) |
| Imports: | png, grid |
| Published: | 2017-01-22 |
| DOI: | 10.32614/CRAN.package.SOFIA |
| Author: | Luis Diaz-Garcia |
| Maintainer: | Luis Diaz-Garcia <diazgarcia at wisc.edu> |
| License: | GPL-3 |
| URL: | http://cggl.horticulture.wisc.edu |
| NeedsCompilation: | no |
| SystemRequirements: | Circos |
| Citation: | SOFIA citation info |
| CRAN checks: | SOFIA results |
| Reference manual: | SOFIA.pdf |
| Package source: | SOFIA_1.0.tar.gz |
| Windows binaries: | r-devel: SOFIA_1.0.zip, r-release: SOFIA_1.0.zip, r-oldrel: SOFIA_1.0.zip |
| macOS binaries: | r-release (arm64): SOFIA_1.0.tgz, r-oldrel (arm64): SOFIA_1.0.tgz, r-release (x86_64): SOFIA_1.0.tgz, r-oldrel (x86_64): SOFIA_1.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.