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If you use this R package in your research paper, please cite as Heidrich V. et al. (2021). When referencing the SRS algorithm itself, please cite Beule L. & Karlovsky P. (2020).
Beule L, Karlovsky P (2020). “Improved normalization of species count data in ecology by scaling with ranked subsampling (SRS): application to microbial communities.” PeerJ, 8, e9593. https://doi.org/10.7717/peerj.9593.
Heidrich V, Karlovsky P, Beule L (2021). “‘SRS’ R Package and ‘q2-srs’ QIIME 2 Plugin: Normalization of Microbiome Data Using Scaling with Ranked Subsampling (SRS).” Applied Sciences, 11(23)(11473). https://doi.org/10.3390/app112311473.
Corresponding BibTeX entries:
@Article{, title = {Improved normalization of species count data in ecology by scaling with ranked subsampling (SRS): application to microbial communities}, author = {L. Beule and P. Karlovsky}, journal = {PeerJ}, volume = {8}, pages = {e9593}, year = {2020}, url = {https://doi.org/10.7717/peerj.9593}, }
@Article{, title = {‘SRS’ R Package and ‘q2-srs’ QIIME 2 Plugin: Normalization of Microbiome Data Using Scaling with Ranked Subsampling (SRS)}, author = {V. Heidrich and P. Karlovsky and L. Beule}, journal = {Applied Sciences}, volume = {11(23)}, number = {11473}, year = {2021}, url = {https://doi.org/10.3390/app112311473}, }
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.