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SeqMADE: Network Module-Based Model in the Differential Expression Analysis for RNA-Seq

A network module-based generalized linear model for differential expression analysis with the count-based sequence data from RNA-Seq.

Version: 1.0
Depends: R (≥ 2.1.0), MASS
Published: 2016-06-27
DOI: 10.32614/CRAN.package.SeqMADE
Author: Mingli Lei, Jia Xu, Li-Ching Huang, Lily Wang, Jing Li
Maintainer: Mingli Lei <leimingli2013 at sjtu.edu.cn>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: SeqMADE results

Documentation:

Reference manual: SeqMADE.pdf

Downloads:

Package source: SeqMADE_1.0.tar.gz
Windows binaries: r-devel: SeqMADE_1.0.zip, r-release: SeqMADE_1.0.zip, r-oldrel: SeqMADE_1.0.zip
macOS binaries: r-release (arm64): SeqMADE_1.0.tgz, r-oldrel (arm64): SeqMADE_1.0.tgz, r-release (x86_64): SeqMADE_1.0.tgz, r-oldrel (x86_64): SeqMADE_1.0.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.