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A bioinformatics tool for the estimation of the tumor purity from sequencing data. It uses the set of putative clonal somatic single nucleotide variants within copy number neutral segments to call tumor cellularity.
| Version: | 1.0.0 |
| Depends: | R (≥ 2.10) |
| Imports: | grDevices, graphics, stats |
| Published: | 2019-01-11 |
| DOI: | 10.32614/CRAN.package.TPES |
| Author: | Alessio Locallo, Davide Prandi, Francesca Demichelis |
| Maintainer: | Alessio Locallo <alessio.locallo at gmail.com> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| CRAN checks: | TPES results |
| Reference manual: | TPES.pdf |
| Package source: | TPES_1.0.0.tar.gz |
| Windows binaries: | r-devel: TPES_1.0.0.zip, r-release: TPES_1.0.0.zip, r-oldrel: TPES_1.0.0.zip |
| macOS binaries: | r-release (arm64): TPES_1.0.0.tgz, r-oldrel (arm64): TPES_1.0.0.tgz, r-release (x86_64): TPES_1.0.0.tgz, r-oldrel (x86_64): TPES_1.0.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.