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generateTestTable()
creates an Excel file with
sheets that correspond to OMOP-CDM tables.
patientsCDM()
now accepts cdmName
as
argument to allow for custom cdm name.
getEmptyCDM()
returns an empty cdm object.
readPatients()
now has a parameter to select either
Excel or CSV files as an input.
readPatients.xl()
and readPatients.csv
are also exported functions for convenience.
graphCohort()
provides a visualisation of cohort
timelines.
JSONS are saved in the testthat/testCases folder as default for better test self-containment.
Tested with MIMIC database.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.