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TreatmentSelection

This R package includes a suite of descriptive and inferential methods designed to evaluate one or more biomarkers for their ability to guide patient treatment recommendations. relevant functions are:

• trtsel_measures for evaluating the performance of a user-specified marker-based treatment rule
• trtsel for creating trtsel objects
• plot.trtsel for plotting risk curves and more
• evaluate.trtsel for evaluating marker performance
• calibrate.trtsel for assessing model calibration
• compare.trtsel to compare two trtsel objects.

To dowload the package from CRAN, type:

install.packages("TreatmentSelection")

To download and install the most recent version of the package directly from github, type:

if (!require("devtools")) install.packages("devtools")
devtools::install_github("TreatmentSelection", "mdbrown")

A manuscript describing the methods employed in the package can be found here and a brief tutorial is available here.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.