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To cite adjclust in publications, please use

Ambroise C, Dehman A, Neuvial P, Rigaill G, Vialaneix N (2019). “Adjacency-constrained hierarchical clustering of a band similarity matrix with application to genomics.” Algorithms for Molecular Biology, 14, 363–389. doi:10.1186/s13015-019-0157-4.

Randriamihamison N, Vialaneix N, Neuvial P (2020). “Applicability and interpretability of Ward’s hierarchical agglomerative clustering with or without contiguity constraints.” Journal of Classification, 38, 363–389. doi:10.1007/s00357-020-09377-y.

Corresponding BibTeX entries:

  @Article{,
    author = {Christophe Ambroise and Alia Dehman and Pierre Neuvial
      and Guillem Rigaill and Nathalie Vialaneix},
    title = {Adjacency-constrained hierarchical clustering of a band
      similarity matrix with application to genomics},
    journal = {Algorithms for Molecular Biology},
    year = {2019},
    volume = {14},
    issue = {22},
    pages = {363–389},
    doi = {10.1186/s13015-019-0157-4},
  }
  @Article{,
    title = {Applicability and interpretability of Ward’s hierarchical
      agglomerative clustering with or without contiguity constraints},
    author = {Nathanael Randriamihamison and Nathalie Vialaneix and
      Pierre Neuvial},
    journal = {Journal of Classification},
    year = {2020},
    volume = {38},
    issue = {2},
    pages = {363–389},
    doi = {10.1007/s00357-020-09377-y},
  }

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.