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bigPLSR 0.7.2
- Code and documentation fixes requested by CRAN.
bigPLSR 0.7.1
- New tuning option:
options(bigPLSR.stream.block_align = 8192L). All streamed
backends (bigmem SIMPLS, streamed scores, RKHS/klogitpls Gram passes,
and bigmem predict) round their chunk_size up to a
multiple of this alignment, then clamp to the available number of rows.
Typical sweet spots are 4096–16384 on modern CPUs.
- If you always need scores on disk, prefer
scores = "big" to avoid large R dense allocations; it
streams directly into a big.matrix.
- Added benchmarks results and analysis as two vignettes.
bigPLSR 0.7.0
- Added
plot_pls_bootstrap_scores() and group-aware
ellipses for plot_pls_biplot() to visualise latent
structures.
- Exposed
bigPLSR_stream_kstats() for streamed RKHS
centering statistics and corrected the bigmemory RKHS interface to
accept dense response blocks.
bigPLSR 0.6.9
- Stabilised kernel logistic PLS class weighting, reinstated IRLS
fallbacks and improved dense/big-memory parity.
- Reworked the Kalman-filter state helper to reuse the SIMPLS backend,
ensuring identical coefficients/intercepts to batch fits.
- Added dedicated RKHS/RKHS-XY and plotting vignettes, and refreshed
the PLS1/PLS2 benchmarking guides with notes on the new algorithms and
parallel helpers.
bigPLSR 0.6.8
- Added optional
future-powered parallel execution to
pls_cross_validate() and pls_bootstrap().
- Extended
pls_bootstrap() with (X, Y) and (X, T)
strategies, percentile and BCa confidence intervals, numerical
summaries, and coefficient boxplots.
- Added group-aware score plotting with confidence ellipses in
plot_pls_individuals().
- Added vignettes covering cross-validation/information-criteria
workflows and bootstrap diagnostics.
bigPLSR 0.6.7
- kernelpls on backend=‘bigmem’ now uses streaming XXᵗ/column paths;
the previous dense fallback was removed. Control with
options(bigPLSR.kpls_gram = ‘rows’|‘cols’|‘auto’) and
bigPLSR.chunk_rows, bigPLSR.chunk_cols.
bigPLSR 0.6.6
- Vignettes: Kernel and Streaming PLS Methods, Automatic
Algorithm Selection.
- Stub C++ entry points for RKHS / kernel logistic / sparse KPLS /
KF-PLS.
bigPLSR 0.6.5
- Algorithm auto-selection: new internal heuristic chooses among
- XtX SIMPLS (standard cross-product SIMPLS),
- XXt (“widekernelpls”) for n << p,
- NIPALS when memory is tight or rank is low. Tuned
by
options(bigPLSR.mem_budget_gb = 8). Users can override
with algorithm=.
- Kernel-style PLS routes:
algorithm = "kernelpls" and
algorithm = "widekernelpls" implementing Dayal &
MacGregor–style (1997) kernel PLS in X-space and wide-X (XXᵗ)
space.
- Implemented high-performance kernel and wide-kernel PLS algorithms
in
pls_fit() for both dense and bigmemory backends using
RcppArmadillo.
- Introduced optional coefficient thresholding.
- Added fast-running examples to all exported functions to improve
documentation usability on CRAN.
bigPLSR 0.6.4
- Added kernel PLS and wide-kernel PLS algorithms to
pls_fit() for both dense and bigmemory backends.
- Refreshed plotting helpers with variable plots, arrow-based loadings
and a dedicated VIP bar plot.
- Introduced convenience prediction wrappers, information-criteria
helpers, and expanded cross-validation/bootstrapping utilities to
support the new algorithms.
- Improved summaries with explained-variance reporting and updated
package documentation.
bigPLSR 0.6.2
- Added cross validation and bootstrap for plsR.
bigPLSR 0.6.1
- Added plots and summaries for
pls_fit().
bigPLSR 0.6.0
- Added unified path
pls_fit() for plsR regression that
features : dense and bigmemory, simpls and nipals.
bigPLSR 0.5.0
- Added several plsR implementations. Benchmarks.
bigPLSR 0.4.0
- Maintainer email update
- Added unit tests
bigPLSR 0.3.0
bigPLSR 0.2.0
- Improving code and help pages
bigPLSR 0.1.0
- Implementing gpls, sgpls based models
bigPLSR 0.0.1
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