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autoplot.bumbldf()
the first argument has been
re-named from x
to object
for consistency with
other autoplot()
methods.bumbl
now uses the lifecycle
package to
manage function lifecycletest_df
, containing simulated data
used for package testing.tau_optim_maxit
argument to
bumbl()
that is passed to optim()
. Mostly for
getting consistent convergence failures in tests, but possibly useful to
end user.bumbl()
assumes a switchpoint, and doesn’t test for one.bumbl()
to use glm()
instead of
lm()
to fit models. Uses log-link gaussian error by
default.family
argument in bumbl()
now passed
directly to glm()
unless "negbin"
, in which
case MASS::glm.nb()
is used....
argument to bumbl()
to pass
additional arguments (e.g. offset) to glm()
or
glm.nb()
keep.model
argument to bumbl()
which outputs a list-column with the models fit to each colony.bombus
databumbl_plot()
and instead added a
plot()
method for base R plots and an
autoplot()
method for ggplot2
optim()
.
Removed tau
argument to bumbl()
and
brkpt()
as it is no longer applicable (may be added again
in the future, but with different behavior).bumbl()
no longer errors when a single colony produces
an errorbombus
data to include cumulative floral
resourcesbumbl()
to
return the incorrect colony IDsbubml_plot()
for checking the output of
bumbl()
NEWS.md
file to track changes to the
package.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.