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read_camtrapdp()
now updates (or creates) the spatial,
temporal and taxonomic scope in the metadata based on the data (#130,
#164).read_camtrapdp()
now upgrades datasets to Camtrap DP
1.0.1. The internal function convert()
has been renamed to
upgrade()
(#113).write_camtrapdp()
writes a Camera Trap Data Package
to disk as a datapackage.json
and CSV files (#137). This
means you can now read, update and write Camtrap DP datasets.contributors()
returns a tibble with contributors
(#140).individuals()
returns a data frame with unique
individuals (#149).taxa()
now removes duplicates (#130).filter_deployments()
and
deployments()<-
now update the spatial, temporal and
taxonomic scope in the metadata based on the returned data (#100,
#132).filter_observations()
, filter_media()
,
media()<-
and observations()<-
now
update the taxonomic scope in the metadata based on the returned data
(#89, #100, #130).write_dwc()
now adds
identificationVerificationStatus
for observations
classified by humans with 100% certainty (#158).write_dwc()
now allows to create occurrences from
media-based observations (#172).write_eml()
transforms Camtrap DP metadata to EML
(#99). This function is used by GBIF to create metadata for a dataset
page.merge_camtrapdp()
allows to merge two datasets
(#112). This can be useful to combine data from multiple studies.round_coordinates()
allows to fuzzy/generalize
location information by rounding deployment latitude
and
longitude
. It also updates
coordinateUncertainty
in the deployments and
coordinatePrecision
and spatial scope in the metadata
(#106).shift_time()
allows to shift/correct date-times in
data and metadata for specified deploymentIDs and duration (#108).update_taxon()
allows to update taxonomic
information in data and metadata (#159).build_taxa()
is renamed to
taxonomic()
(#130).print()
prints a human-readable summary of
the Camera Trap Data Package (#8).fieldsEnclosedBy
issue in meta.xml
, so
GBIF occurrence processing correctly handles commas in fields
(#95).write_dwc()
no longer writes to "."
by
default, since this is not allowed by CRAN policies. The user needs to
explicitly define a directory (#79).read_camtrapdp()
reads data files from a
Camtrap DP into memory (#9). It will make the data easier to use, by
assigning taxonomic information (found in the metadata) to the
observations and eventID
s (found in the observations) to
the media (#37).deployments()
,
media()
and observations()
return a data frame
with the deployments, media and observations respectively (#29). These
functions also have an assignment equivalent (#50).locations()
,
events()
and taxa()
return a data frame with
unique locations, events and taxa respectively (#22, #57, #17).filter_deployments()
,
filter_observations()
and filter_media()
allow
to filter data. They work similarly to dplyr’s
filter()
(#23).write_dwc()
transforms a Camera Trap Data
Package to a Darwin Core Archive (#55).example_package()
returns the latest
Camtrap DP example dataset and caches the result (#24, #67).version()
allows to get the version of a
camtrapdp object.check_camtrapdp()
validates a
camtrapdp object (#34).convert()
converts camtrapdp
objects to the latest version. This function is currently not used, as
the only supported version is Camtrap DP 1.0 (#9).%>%
) is included in NAMESPACE, so you don’t have to
load dplyr (or magrittr) to use it (#56). %>%
and
.data
are imported at package level, so they can be used in
functions without namespace (#37).These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.