The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

To cite package 'cladoRcpp' in publications use:

Matzke N (2018). cladoRcpp v0.15.1: C++ Implementations of Phylogenetic Cladogenesis Calculations. University of Auckland, New Zealand. In addition to citing the CRAN packages, please cite these when using the rexpokit/cladoRcpp/BioGeoBEARS packages:

Matzke, Nicholas J. (2013). Probabilistic historical biogeography: new models for founder-event speciation, imperfect detection, and fossils allow improved accuracy and model-testing. Frontiers of Biogeography, 5(4), 242-248. http://escholarship.org/uc/item/44j7n141

Others:

Matzke, Nicholas Joseph (2014). Model Selection in Historical Biogeography Reveals that Founder-event Speciation is a Crucial Process in Island Clades. Systematic Biology, 63(6), 951-970 , https://cran.r-project.org/package=cladoRcpp.

A lot of time and effort in creating cladoRcpp, as well as the sister packages 'rexpokit' and 'BioGeoBEARS', please cite it and the other packages when using it for publication. See also ‘citation("cladoRcpp")’ for citing R packages.

Corresponding BibTeX entry:

  @Manual{,
    title = {cladoRcpp v0.15.1: C++ Implementations of Phylogenetic
      Cladogenesis Calculations},
    author = {Nicholas J. Matzke},
    organization = {University of Auckland},
    address = {New Zealand},
    year = {2018},
    note = {In addition to citing the CRAN packages, please cite these
      when using the rexpokit/cladoRcpp/BioGeoBEARS packages:

    Matzke, Nicholas J. (2013). Probabilistic historical biogeography:
      new models for founder-event speciation, imperfect detection, and
      fossils allow improved accuracy and model-testing. Frontiers of
      Biogeography, 5(4), 242-248.
      http://escholarship.org/uc/item/44j7n141

    Others:

    Matzke, Nicholas Joseph (2014). Model Selection in Historical
      Biogeography Reveals that Founder-event Speciation is a Crucial
      Process in Island Clades. Systematic Biology, 63(6), 951-970 },
    url = {https://cran.r-project.org/package=cladoRcpp},
  }

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.