drugsens: Automated Analysis of 'QuPath' Output Data and Metadata Extraction

A comprehensive toolkit for analyzing microscopy data output from 'QuPath' software. Provides functionality for automated data processing, metadata extraction, and statistical analysis of imaging results. The methodology implemented in this package is based on Labrosse et al. (2024) <doi:10.1016/j.xpro.2024.103274> "Protocol for quantifying drug sensitivity in 3D patient-derived ovarian cancer models", which describes the complete workflow for drug sensitivity analysis in patient-derived cancer models.

Version:	0.1.0
Depends:	R (≥ 4.2)
Imports:	dplyr, ggplot2, ggpubr, knitr, roxygen2, stats, stringr, tidyr, tidyselect, utils, testthat (≥ 3.0.0)
Published:	2025-01-16
DOI:	10.32614/CRAN.package.drugsens
Author:	Flavio Lombardo [aut, cre, cph], Ricardo Coelho [cph], Ovarian Cancer Research [cph], University of Basel and University Hospital Basel [cph]
Maintainer:	Flavio Lombardo <flavio.lombardo at unibas.ch>
BugReports:	https://git.scicore.unibas.ch/ovca-research/drugsens/-/issues
License:	MIT + file LICENSE
URL:	https://git.scicore.unibas.ch/ovca-research/drugsens/
NeedsCompilation:	no
SystemRequirements:	QuPath™ 4.0.0 or higher
Materials:	README NEWS
CRAN checks:	drugsens results

Documentation:

Reference manual:

drugsens.pdf

Downloads:

Package source:	drugsens_0.1.0.tar.gz
Windows binaries:	r-devel: drugsens_0.1.0.zip, r-release: not available, r-oldrel: drugsens_0.1.0.zip
macOS binaries:	r-release (arm64): drugsens_0.1.0.tgz, r-oldrel (arm64): drugsens_0.1.0.tgz, r-release (x86_64): not available, r-oldrel (x86_64): not available

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