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covidcast_epidata() will still print if
fields are missing.EPIDATR_USE_CACHE environment
variable, allowing it to be any value convertable by
as.logical() and handle the case when it can’t be
converted.parse_api_date since it already supports both common
formats. #276EPIDATR_USE_CACHE only supported exactly “TRUE” before.
Now it supports all logical values and includes a warning when any value
that can’t be converted to logical is provided. #273missing doesn’t count default values as non-missing. If
a user doesn’t pass geo_values or time_values
(both of which default to "*" in
pub_covidcast), or dates (in
pub_covid_hosp_state_timeseries), the missing check fails.
To avoid this, just don’t check missingness of those two arguments.fetch_args_list now has an refresh_cache
argument, which is FALSE by default.as_of values in
Date format to pub_covidcast while caching is
enabled (#259).pub_covidcast data source
nchs-mortality, parse dates as epiweek and
expect epiweek inputs from user (#260).pub_covidcast when user doesn’t pass
geo_values or time_values, even though those
arguments have defaults (#268).pub_covid_hosp_state_timeseries now supports use of the
as_of parameter (#209).release_date and latest_update fields are
now parsed as Date, rather than as text. This change
impacts several endpoints.get_auth_key renamed to get_api_key
(#181).get_api_key no longer reads from R options and only
uses environment variables (#217).pvt_twitter and pub_wiki now use
time_type and time_values args instead of
mutually exclusive dates and epiweeks (#236).
This matches the interface of the pub_covidcast
endpoint.timeout_seconds to 15 minutes to
allow large queries by default.Date objects passed to version arguments
as_of and issues in endpoints (#192,
#194).clear_cache now handles positional arguments just like
set_cache (#197).set_api_key now available to help persist API key
environment variables (#181, #217).pub_fluview_meta fixed to fetch the
response automatically.pub_covid_hosp_state_timeseries now correctly parses
the issue field, instead of returning a missing value
(#202).pub_fluview_meta, latest_issue field is
now parsed as epiweek, rather than being parsed as Date and
returning a missing value.set_cache cache size no longer runs into integer
overflow (#189).set_cache and other caching functions.pub_.avail_endpoints to be more
readable.covidcast_epidata() to be more
readable.fetch function internal.fetch and fetch_* function
interfaces now rely on fetch_args_list.fetch_args_list which returns a list of arguments
to be passed to fetch.covidcast_epidata.covidcast_epidata as experimental and do not
export it.covidcast arg data_source to
source.covidcast args issues,
lag, and as_of mutually exclusive.covid_hosp_facility_lookup args
state, ccn, city,
zip, and fips_code mutually exclusive.timeout_seconds and return_empty
arguments to fetch().fetch_{tbl,classic,df,json,csv} functions have been
replaced by the fetch() function, which almost always
returns a tibble, except when used with a limited number of older
endpoints (such as delphi() and meta()), where
it will output a nested list structure.delphi.epidata to epidatr. To migrate, run the
installation command above, followed by
remove.packages("delphi.epidata"), and adjust all
references to the package name accordingly.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.