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factReg: Multi-Environment Genomic Prediction with Penalized Factorial Regression

Multi-environment genomic prediction for training and test environments using penalized factorial regression. Predictions are made using genotype-specific environmental sensitivities as in Millet et al. (2019) <doi:10.1038/s41588-019-0414-y>.

Version: 1.0.0
Depends: R (≥ 3.6)
Imports: glmnet, mathjaxr, Matrix, rrBLUP, stats
Suggests: tinytest
Published: 2023-07-07
DOI: 10.32614/CRAN.package.factReg
Author: Kruijer Willem ORCID iD [aut], Bart-Jan van Rossum ORCID iD [aut, cre], Vahe Avagyan ORCID iD [ctb]
Maintainer: Bart-Jan van Rossum <bart-jan.vanrossum at wur.nl>
License: GPL-3
NeedsCompilation: no
Materials: README NEWS
CRAN checks: factReg results

Documentation:

Reference manual: factReg.pdf

Downloads:

Package source: factReg_1.0.0.tar.gz
Windows binaries: r-devel: factReg_1.0.0.zip, r-release: factReg_1.0.0.zip, r-oldrel: factReg_1.0.0.zip
macOS binaries: r-release (arm64): factReg_1.0.0.tgz, r-oldrel (arm64): factReg_1.0.0.tgz, r-release (x86_64): factReg_1.0.0.tgz, r-oldrel (x86_64): factReg_1.0.0.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.