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News

ftrCOOL 2.0.0

Added the following functions:

Amino Acid Functions

• AESNN3
• ASDC
• binary_3bit_T1
• binary_3bit_T2
• binary_3bit_T3
• binary_3bit_T4
• binary_3bit_T5
• binary_3bit_T6
• binary_3bit_T7
• binary_5bit_T1
• binary_5bit_T2
• binary_6bit
• DistancePair
• OPF_7bit_T1
• OPF_7bit_T2
• OPF_7bit_T3
• OPF_10bit

DNA/RNA Functions

• ASDC_DNA
• ASDC_RNA
• DPCP_DNA
• DPCP_RNA
• KNN_DNA
• KNN_RNA
• Mismatch_DNA
• Mismatch_RNA
• MMI_DNA
• MMI_RNA
• PS2_DNA
• PS2_RNA
• PS3_DNA
• PS3_RNA
• PS4_DNA
• PS4_RNA
• TPCP_DNA
• TPCP_RNA
• Zcurve9bit_DNA
• Zcurve9bit_RNA
• Zcurve12bit_DNA
• Zcurve12bit_RNA
• Zcurve36bit_DNA
• Zcurve36bit_RNA
• Zcurve48bit_DNA
• Zcurve48bit_RNA
• Zcurve144bit_DNA
• Zcurve144bit_RNA
• Zcurve9bit_DNA

Fixed a bug in ‘upto’ parameter of CkSNUCpair_DNA and CkSAApair

ftrCOOL 1.1.1

Fixed a bug in the example of function DisorderB

ftrCOOL 1.1.0

Fixed bugs in the following functions:

• AAutoCor()
• AutoCorDiNUC()
• AutoCorTriNUC()

Renamed the following functions:

• AutoCorDiNUC to AutoCorDiNUC_DNA
• AutoCorTriNUC to AutoCorTriNUC_DNA
• CkSNUCpair to CkSNUCpair_DNA
• CodonUsage to CodonUsage_DNA
• DiNUC2Binary to DiNUC2Binary_DNA
• DiNUCindex to DiNUCindex_DNA
• ENUComposition to ENUComposition_DNA
• ExpectedValKmerNUC to ExpectedValKmerNUC_DNA
• G_Ccontent to G_Ccontent_DNA
• kNUComposition to kNUComposition_DNA
• LocalPoSpKaaF to LocalPoSpKAAF
• LocalPoSpKnucF to LocalPoSpKNUCF_DNA
• maxORFlength to maxORFlength_DNA
• NUC2Binary to NUC2Binary_DNA
• NUCKpartComposition to NUCKpartComposition_DNA
• PSEkNUCdi to PSEkNUCdi_DNA
• PSEkNUCTri to PSEkNUCTri_DNA
• TriNucIndex to TriNucIndex_DNA

Added the following functions:

• ANF_RNA()
• ASA()
• APkNUCdi_RNA()
• AutoCorDiNUC_RNA()
• CkSNUCpair_RNA()
• CodonUsage_RNA()
• DiNUC2Binary_RNA()
• DiNUCindex_RNA()
• DisorderB()
• DisorderC()
• DisorderS()
• ENUComposition_RNA()
• ExpectedValKmerNUC_RNA()
• G_Ccontent_RNA()
• KNNPeptide()
• KNNProtein()
• kNUComposition_RNA()
• LocalPoSpKNUCF_RNA()
• maxORF_RNA()
• maxORFlength_RNA()
• NCP_DNA()
• NCP_RNA()
• NUC2Binary_RNA()
• NUCKpartComposition_RNA()
• PCPseDNC()
• PSEkNUCdi_RNA()
• PSSM()
• PSTNPds()
• PSTNPss_DNA()
• PSTNPss_RNA()
• SSEB()
• SSEC()
• SSES()
• TorsionAngle()

Substituted functions:

• ANF_DNA() with function novel_PseKNC()

Improving the execution time of most functions

ftrCOOL 0.1.0

Initial Release

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.