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geneNR 2.0.1

New Functions and Features

• geneQTL: Identifies candidate genes based on Quantitative Trait Loci (QTL) analysis.
• import_hmp: Enables importing Hapmap genotypic data files.
• import_vcf: Provides support for importing VCF (Variant Call Format) data files.
• plot_SNP: Visualizes SNP distribution on a chromosome map.
• plot_summariseSNP: Plots SNP distribution across chromosomes.
• summariseSNP: Calculates SNP distribution across chromosomes.
• summariseSNP_vcf: Calculates SNP distribution across chromosomes from VCF data.

Sample Data Additions

• sample_data_rice, sample_data_rice_qtl: Added rice sample datasets.
• sample_data_wheat, sample_data_wheat_custom, sample_data_wheat_qtl: Added wheat sample datasets.

Enhancements

• Improved functionality and performance of existing features.
• Updated documentation for better clarity and usability.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.