The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
Jürges C, Dölken L, Erhard F (2018). “Dissecting newly transcribed and old RNA using GRAND-SLAM.” Bioinformatics. doi:10.1093/bioinformatics/bty256, https://doi.org/10.1093/bioinformatics/bty256.
Erhard F, Baptista M, Krammer T, Hennig T, Lange M, Arampatzi P, Theis F, Saliba A, Dölken L (2019). “scSLAM-seq reveals core features of transcription dynamics in single cells.” Nature. doi:10.1038/s41586-019-1369-y, https://doi.org/10.1038/s41586-019-1369-y.
Rummel T, Sakellaridi L, Erhard F (2023). “grandR: a comprehensive package for nucleotide conversion RNA-seq data analysis.” Nature Communications. doi:10.1038/s41467-023-39163-4, https://doi.org/10.1038/s41467-023-39163-4.
Corresponding BibTeX entries:
@Article{, author = {Christopher Jürges and Lars Dölken and Florian Erhard}, title = {Dissecting newly transcribed and old RNA using GRAND-SLAM}, journal = {Bioinformatics}, year = {2018}, doi = {10.1093/bioinformatics/bty256}, url = {https://doi.org/10.1093/bioinformatics/bty256}, }
@Article{, author = {Florian Erhard and Marisa Baptista and Tobias Krammer and Thomas Hennig and Marius Lange and Panagiota Arampatzi and Fabian Theis and Antoine-Emmanuel Saliba and Lars Dölken}, title = {scSLAM-seq reveals core features of transcription dynamics in single cells}, journal = {Nature}, year = {2019}, doi = {10.1038/s41586-019-1369-y}, url = {https://doi.org/10.1038/s41586-019-1369-y}, }
@Article{, author = {Teresa Rummel and Lygeri Sakellaridi and Florian Erhard}, title = {grandR: a comprehensive package for nucleotide conversion RNA-seq data analysis}, journal = {Nature Communications}, year = {2023}, doi = {10.1038/s41467-023-39163-4}, url = {https://doi.org/10.1038/s41467-023-39163-4}, }
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.