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hutilscpp 0.10.6

Bug fix

• is_seq (internal function in finp): fixed UB when length(table) == 0.

hutilscpp 0.10.5

Internal

• STRING_PTR changed to STRING_PTR_RO as required by new CRAN policies

hutilscpp 0.10.4

Internal

• is_constant does not inherit data.table multithreading

hutilscpp 0.10.3

Bug fixes:

• and3s(rr == 0L) works for raw rr

Internal:

• Fix for -Wformat checks

hutilscpp 0.10.2

• Fix for new is.atomic behaviour

hutilscpp 0.10.0

• New features
  • abs_diff contains a which.max option = 3.

hutilscpp 0.9.3

• Internal
  • Fix poor coding standards Wstrict-prototypes (f() now f(void))

hutilscpp 0.9.2

• Bug fixes:
  • logical3. When passes expression with non-numeric components, no longer skips as if empty

hutilscpp 0.9.1

• Bug fixes:
  • Fix UBSAN for Comma

hutilscpp 0.9.0

• New functions:
  • abs_diff for non-allocating versions of abs(x - y).
  • character2integer for a faster version of as.integer(gsub("[^0-9]", "", x))
  • Comma, relatedly, prettyNum(x, big.mark = ",")
  • coalesce0 as a convenience function, equivalent to coalesce(x, 0) for correct type of 0.
  • diam and thinner for direct versions of diff(minmax(x)).
  • every_int32 Returns a vector of every integer
  • ModeC most common element of integer vectors.
  • unique_fmatch and uniqueN_fmatch for distinct elements.
• Internal changes
  • complex separation of expressions (and3s and friends) is now done using a different logic, and performs internal logical operations on raw (char) vectors.

hutilscpp 0.8.2

• Bug fixes:
  • sum_and/or is now more consistent at not summing NA values.
• New functions:
  • allNA equivalent to all(is.na(x))

hutilscpp 0.8.1

• Bug fixes:
  • Implies returns correct results for NA results.
• Internal
  • Header change for compatibility with clang13. Thanks to CRAN for reporting.

hutilscpp 0.8.0

• Enhancements:
  • minmax accepts raw input, treating as unsigned characters
• Internal:
  • A change to the LOGICAL C API has been absorbed.

hutilscpp 0.7.2

• Bug fixes
  • Two programming errors detected by valgrind and rchk have been fixed

hutilscpp 0.7.0

Functions are now in C to improve install time and size.

• New functions:
  • Implies for logical implies
  • divisible2 test evenness of numbers
  • fmatchp, finp experimental parallel hashing functions
  • is_sorted and isntSorted for assertions about sorted atomic vectors
  • minmax multithreaded function of c(min(x), max(x))

hutilscpp 0.5.2

• Attempt fix of UBSAN error in which_first

hutilscpp 0.5.1

Bug fixes:

• Reverses a performance regression in which_first, introduced in version 0.5.0, caused by an overeliance on compiler optimization. (#20)
• OpenMP regions have been protected so that the package works without OpenMP

hutilscpp 0.5.0

Breaking changes

• pminV no longer accept non-numeric input
• do_ functions have been removed entirely

Bug fixes:

• pmax0(x, in_place = TRUE) now returns early, rather than checking the vector twice.
• sum_isna now reflects sum(is.na(x)) when x contains NaN.
• sum_isna diverts ALTREP vectors to anyNA for performance and to avoid problems when passed to C++.

New functions:

• which_last for the first index from the last index.
• divisible and divisible16 for returning divisibility
• count_logical fast tabulation of logical vectors
• and3s, or3s, parallelized and separated versions of &
• sum_and3s and sum_or3s, the sums of the above logical vectors.
• whichs for an alternative implementation of which which separates the input
• which_firstNA and which_lastNA for first/last position of missing values

Enhancements:

• which_first accepts argument use.which.max for better performance on known short inputs
• is_constant now accepts nThread for multithreaded checking of constant vectors and is much faster in general even in single-thread mode.
• sum_isna now accepts nThread for multithreaded accumulation of missing value counts
• are_even can be slightly faster on integers if ignoring NA, handles large doubles (like 1e10), and accepts nThread.

hutilscpp 0.3.0

Critical bug fixes:

• is_safe2int(x) now tolerates NaN input. Thanks to CRAN clang-UBSAN.

Bug fixes:

• which_first(x == y) now works properly when length(y) == length(x).

New functions:

• xor2 a faster version of xor.

set.seed(1)
library(hutils)
library(hutilscpp)

bench__mark <- function(...) {
  dplyr::select(bench::mark(..., min_iterations = 12),
                expression, median, `itr/sec`, mem_alloc, n_gc)
}
x <- y <- logical(1e9)
bench__mark(xor(x, y), xor2(x, y))
#> Warning: Some expressions had a GC in every iteration; so filtering is
#> disabled.
#> # A tibble: 2 x 5
#>   expression   median `itr/sec` mem_alloc  n_gc
#>   <chr>      <bch:tm>     <dbl> <bch:byt> <dbl>
#> 1 xor(x, y)    7.956s     0.126  14.901GB    16
#> 2 xor2(x, y)   1.652s     0.530   3.725GB     3
x <- !y
bench__mark(xor(x, y), xor2(x, y))
#> Warning: Some expressions had a GC in every iteration; so filtering is
#> disabled.
#> # A tibble: 2 x 5
#>   expression   median `itr/sec` mem_alloc  n_gc
#>   <chr>      <bch:tm>     <dbl> <bch:byt> <dbl>
#> 1 xor(x, y)    8.227s     0.121  14.901GB    13
#> 2 xor2(x, y)   1.983s     0.460   3.725GB     3

x <- samp(c(TRUE, FALSE), 1e9)
y <- samp(c(TRUE, FALSE), 1e9)

bench__mark(xor(x, y), xor2(x, y))
#> # A tibble: 2 x 5
#>   expression   median `itr/sec` mem_alloc  n_gc
#>   <chr>      <bch:tm>     <dbl> <bch:byt> <dbl>
#> 1 xor(x, y)   20.276s    0.0493  14.901GB    11
#> 2 xor2(x, y)   1.971s    0.506    3.725GB     3

x <- samp(c(TRUE, FALSE, NA), 1e9)
y <- samp(c(TRUE, FALSE), 1e9)

benc__mark(xor(x, y), xor2(x, y))
#> # A tibble: 2 x 5
#>   expression   median `itr/sec` mem_alloc  n_gc
#>   <chr>      <bch:tm>     <dbl> <bch:byt> <dbl>
#> 1 xor(x, y)   25.063s    0.0399  14.901GB     2
#> 2 xor2(x, y)   4.524s    0.221    3.725GB     3

^{Created on 2019-08-25 by the reprex package (v0.3.0)}

hutilscpp 0.2.0

• Added a NEWS.md file to track changes to the package.

Bug fixes:

• which_first(x == y) now supports logical x without returning arcane error messages.

New functions:

• is_constant, for testing atomic vectors and isntConstant for the first different value
• is_sorted and isntSorted (currently private), similarly.
• and3, or3 for ternary and/or enabling vectorized short-circuiting
• sum_isna for counting NA values.

Enhancements

• pminC now handles integer inputs without coercing to double.
• pmaxC(x, a) accepts integer a when x is type double.
• pmax0 and pmin0 perform much better, especially when x is known and marked as sorted, but also due to a better algorithm using absolute value.

set.seed(1)
attach(asNamespace("hutilscpp"))
#> The following object is masked from package:base:
#> 
#>     isFALSE

bench__mark <- function(...) {
  dplyr::select(bench::mark(..., min_iterations = 12),
                expression, median, `itr/sec`, mem_alloc, n_gc)
}
x <- rep_len(rlnorm(1e6, 7, 2), 1e9)
bench__mark(do_pmaxC_dbl(x, 0), do_pmax0_abs_dbl(x))
#> # A tibble: 2 x 5
#>   expression              median `itr/sec`     mem_alloc  n_gc
#>   <chr>                 <bch:tm>     <dbl>     <bch:byt> <dbl>
#> 1 do_pmaxC_dbl(x, 0)  2428.139ms     0.405 3618205.211KB     4
#> 2 do_pmax0_abs_dbl(x)  777.362ms     1.28        6.539KB     0
x <- x - 1
bench__mark(do_pmaxC_dbl(x, 0), do_pmax0_abs_dbl(x))
#> # A tibble: 2 x 5
#>   expression            median `itr/sec` mem_alloc  n_gc
#>   <chr>               <bch:tm>     <dbl> <bch:byt> <dbl>
#> 1 do_pmaxC_dbl(x, 0)    2.394s     0.410   3.451GB     4
#> 2 do_pmax0_abs_dbl(x)   2.590s     0.386   3.451GB     4
x <- sort(x)
bench__mark(do_pmaxC_dbl(x, 0), do_pmax0_radix_sorted_dbl(x))
#> # A tibble: 2 x 5
#>   expression                     median `itr/sec` mem_alloc  n_gc
#>   <chr>                        <bch:tm>     <dbl> <bch:byt> <dbl>
#> 1 do_pmaxC_dbl(x, 0)             3.593s     0.313   6.901GB     5
#> 2 do_pmax0_radix_sorted_dbl(x)   2.306s     0.437   3.451GB     4

x <- rep_len(as.integer(rlnorm(1e6, 7, 2)), 1e9)
bench__mark(do_pmaxC_int(x, 0L), do_pmax0_abs_int(x))
#> # A tibble: 2 x 5
#>   expression              median `itr/sec`     mem_alloc  n_gc
#>   <chr>                 <bch:tm>     <dbl>     <bch:byt> <dbl>
#> 1 do_pmaxC_int(x, 0L) 2041.515ms     0.490 3906256.727KB     3
#> 2 do_pmax0_abs_int(x)  405.266ms     2.45        6.539KB     0
x <- x - 1L
bench__mark(do_pmaxC_int(x, 0L), do_pmax0_abs_int(x))
#> # A tibble: 2 x 5
#>   expression            median `itr/sec` mem_alloc  n_gc
#>   <chr>               <bch:tm>     <dbl> <bch:byt> <dbl>
#> 1 do_pmaxC_int(x, 0L)   1.449s     0.686   3.725GB     2
#> 2 do_pmax0_abs_int(x)   1.766s     0.577   3.725GB     1
x <- sort(x)
bench__mark(do_pmaxC_int(x, 0L), do_pmax0_radix_sorted_int(x))
#> # A tibble: 2 x 5
#>   expression                     median `itr/sec` mem_alloc  n_gc
#>   <chr>                        <bch:tm>     <dbl> <bch:byt> <dbl>
#> 1 do_pmaxC_int(x, 0L)            1.751s     0.568   7.451GB     2
#> 2 do_pmax0_radix_sorted_int(x)   1.404s     0.827   3.725GB     1

^{Created on 2019-08-10 by the reprex package (v0.3.0)}

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