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simgl()
to increase the flexibility
of the simulations.rmbayes()
and associated functions for Bayes
tests for random mating.rmlike()
to fix
issues with local convergence.rmbayesgl()
for Bayes test of random mating when
using genotype likelihoods to account for genotype uncertainty. This
uses the {rstan}
package as a backend.glsim()
for genotype likelihood simulation.qqpvalue()
will now allow the user to return a ggplot
object.menbayesgl()
for testing Mendelian segregation
frequencies from S1 and F1 populations.qqpvalue()
: A QQ-plot function for \(p\)-values on the \(-\log_{10}\)-scale.ts_bands()
: Calculates simultaneous
confidence bands for uniform quantiles.f1dr()
: Estimates the double reduction
rate from an F1 population via maximum likelihood.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.