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iC10: A Copy Number and Expression-Based Classifier for Breast Tumours

Implementation of the classifier described in the paper Ali HR et al (2014) <doi:10.1186/s13059-014-0431-1>. It uses copy number and/or expression form breast cancer data, trains a Tibshirani's 'pamr' classifier with the features available and predicts the iC10 group.

Version: 2.0.2
Imports: pamr, impute, iC10TrainingData
Published: 2024-07-19
DOI: 10.32614/CRAN.package.iC10
Author: Oscar M Rueda ORCID iD [aut, cre]
Maintainer: Oscar M Rueda <Oscar.Rueda at mrc-bsu.cam.ac.uk>
License: GPL-3
NeedsCompilation: no
Materials: NEWS
CRAN checks: iC10 results

Documentation:

Reference manual: iC10.pdf

Downloads:

Package source: iC10_2.0.2.tar.gz
Windows binaries: r-devel: iC10_2.0.2.zip, r-release: iC10_2.0.2.zip, r-oldrel: iC10_2.0.2.zip
macOS binaries: r-release (arm64): iC10_2.0.2.tgz, r-oldrel (arm64): iC10_2.0.2.tgz, r-release (x86_64): iC10_2.0.2.tgz, r-oldrel (x86_64): iC10_2.0.2.tgz
Old sources: iC10 archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=iC10 to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.