The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

icesSAG 1.5.0 (2024-10-24)

• Update all functions to point to new API.
• Remove token authentication, and move to JWT tokens via icesConnect.
• Introduce the use of caching for some functions to reduce API requests.
• export GET and POST request functions.
• Depreciate redundant graph functions (e.g. YSSBR).
• New functions to set package options: sag_use_token() and sag_messages().
• Link messages package option to quiet argument in get requests.
• GetListStocks now accepts a stock and modifiedAfter arguments for additional server side filtering.
• Remove file upload capability.

icesSAG 1.4.1 (2023-05-11)

• bug fix for stockInfo() and documentation.

icesSAG 1.4.0 (2022-02-17)

• add new function getCustomColumns().

icesSAG 1.3-8 (2019-10-29)

• Display warning if stock name contains – and not -, and quietly fix.

icesSAG 1.3-7 (2019-05-14)

• Allow upload to contiue if errors found by DATSU - gives warning, not error.
• Add function to parse stock status table values due to change in web service XML data structure.
• Fix name in upload format specification CatchLandingsUnits.

icesSAG 1.3-6 (2019-03-13)

• Fixed bug in parsing of XML tables. Function now reads the WSDL data that is included as an internal data set (list of variable names)
• Set all examples to dontrun
• code now checked against lintr for consistent style

icesSAG 1.3-5 (2018-06-08)

• added function getStockSourceData() to download the XML file that was origionally uploaded.

icesSAG 1.3-4 (2018-05-01)

• added function getLatestStockAdviceList()
• export print methods for sag.list and sag.data.frame for fishdata and fishinfo objects used to upload data.
• improved personal access token logic
• improved help documentation
• Added StockCategory, Purpose, ModelType, ModelName to upload functions
• Added filter for assessment Purpose in getSAG()
• fixed bugs arising from changes to xml2 package
• fixed bug arsing from change in ICES Datsu web service

icesSAG 1.3-2 (2017-05-06)

• User sets SAG database access token in a ~/.Renviron_SG file.
• Addressed non CRAN compliant behaviour: user must create .Renviron file themselves.

icesSAG 1.3-1 (2017-05-04)

• Improved createSAGxml() internal data validation.

icesSAG 1.3-0 (2017-04-05)

• Added function uploadStock() to upload data to SAG database via uploadXMLFile(). The functions readSAGxml() and createSAGxml() convert data to and from SAG XML upload format.
• Added functions stockInfo() and stockFishdata() to prepare data for upload. Uploads require user access tokens, available from the main SAG website.
• Added function getStockStatusValues() to get stock status table, and getYSBRSummaryTable() to get yield and SSB per recruit.
• Added functions getSAGSettings() and setSAGSettings() to get and set graph settings. The function getSAGTypeGraphs() lists the SAG graph types.
• Renamed findKey() to findAssessmentKey().

icesSAG 1.2-1 (2017-03-24)

• Hotfix release to match changes in the underlying web service, regarding assessment keys.

icesSAG 1.2-0 (2016-12-05)

• Added functions get*Graph() to fetch standard graph images, with a corresponding plot() method. The convenience function getSAGGraphs() fetches four commonly used graphs.
• Added argument ‘regex’ to findKey().
• Fixed bug in getSAG() when different column names appear in stock summaries and combine = TRUE.
• Removed dependency on RCurl and XML by using base functions to download and parse data.

icesSAG 1.1-0 (2016-10-29)

• Added function findKey() to look up a unique stock list key.
• Added function getSAG() to import summary results and reference points, without finding a lookup key first.
• Changed argument in functions getSummaryTable() and getFishStockReferencepoints() from ‘year’ to ‘key’.
• Improved XML parsing, so both leading and trailing white space is removed.
• Improved XML parsing, so “” and “NA” is converted to NA.
• Improved XML parsing, so data frame columns are automatically coerced to the appropriate storage mode (character, numeric, integer).

icesSAG 1.0-0 (2016-08-09)

• Initial release, with functions getListStocks(), getSummaryTable(), and getFishStockReferencePoints().

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.