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This is the development site of incR, an R package to
analyse avian incubation temperatures and incubation behaviour. The code
and the documentation are updated often - check for latest version here
and on CRAN.
incR takes a time-series of incubation temperature,
scores incubation and provides a suite of functions to calculate
biologically relevant metrics of incubation.
Please, if you use the package and find bugs or think of any improvement, get in contact to implement your recommendations.
Version 2.0.0 has been released. A new version of ‘incRscan’ (‘incRscan_v2’) has been created to process every day with information (unlike the original ‘incRscan’) applying a fixed temperature threshold to detect on/off-bouts. Also, the code in ‘incRenv’ has been revisited and the function is now a lot faster.
Please, if you use incR cite it as:
Capilla-Lasheras, Pablo (2020). incR: a new R package to analyse incubation behaviour. Journal of Avian Biology 49:e01710. https://doi.org/10.1111/jav.01710
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.