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The function get_parameters() is intended to be used within a docker
container with a certain file structure to read keyword arguments from
the file /in/parameters.json automagically. The file
/src/tool.yaml contains specifications on these keyword
arguments, which are then passed as input to containerized R tools in
the tool-runner
framework.
A template for a containerized R tool, which can be used as a basis for developing new tools, is available at the following URL: https://github.com/VForWaTer/tool_template_r.
You can install the development version of json2aRgs from GitHub with:
# install.packages("devtools")
devtools::install_github("VForWaTer/json2aRgs")These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.