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Not An Introduction to knitr

Yihui Xie

2025-03-15

The knitr package is an alternative tool to Sweave based on a different design with more features. This document is not an introduction, but only serves as a placeholder to guide you to the real manuals, which are available on the package website https://yihui.org/knitr/ (e.g. the main manual and the graphics manual ), and remember to read the help pages of functions in this package. There is a book “Dynamic Docuemnts with R and knitr” for this package, too.

Below are code chunk examples:

options(digits = 4)
rnorm(20)
#>  [1]  1.58750 -0.16827 -1.83852  1.03203 -0.57857  0.80646 -1.59546  0.24443
#>  [9] -0.28545  0.96251  0.55820 -0.99688  0.02842  0.12531  0.85322 -1.23343
#> [17]  0.70548 -0.89049  1.07269 -1.98522
fit = lm(dist ~ speed, data = cars)
b = coef(fit)
Estimate Std. Error t value Pr(>|t|)
(Intercept) -17.579 6.758 -2.601 0.012
speed 3.932 0.416 9.464 0.000

The fitted regression equation is \(Y=-17.6+3.93x\).

par(mar=c(4, 4, 1, .1))
plot(cars, pch = 20)
abline(fit, col = 'red')

A scatterplot with a regression line.

1 A scatterplot with a regression line.

References

Xie Y (2025). knitr: A General-Purpose Package for Dynamic Report Generation in R. R package version 1.50, https://yihui.org/knitr/.

Xie Y (2015). Dynamic Documents with R and knitr, 2nd edition. Chapman and Hall/CRC, Boca Raton, Florida. ISBN 978-1498716963, https://yihui.org/knitr/.

Xie Y (2014). “knitr: A Comprehensive Tool for Reproducible Research in R.” In Stodden V, Leisch F, Peng RD (eds.), Implementing Reproducible Computational Research. Chapman and Hall/CRC. ISBN 978-1466561595.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.