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landsepi 1.5.1 (2024-09-23)

• fixed bugs

landsepi 1.5.0 (2024-09-02)

• Redesigned shiny app: simplified parameterization, include global/local inoculum, include more outputs (graphics & tables)
• Updated webpage

landsepi 1.4.0 (2024-03-12)

• [breaking change] Changed parameterization of inoculum to allow specific spatial location and genetic composition of inoculum (thanks to Manon)
• Changed parameterization of pathogen survival probability to allow different probabilities for different croptypes and years
• Added 2 parameters (adaptation_cost and relative_advantage) to allow two types of fitness costs paid by pathogens adapted to resistance (on all hosts, or only for unnecessary virulence)
• Help parameterization of treatments with loadTreatment()
• Updated documentation and vignettes

landsepi 1.3.0 (2023-07-19)

• [breaking change] Added parameterization of grapevine mildew (thanks to Marta)
• [breaking change] Added parameterization of black sigatoka of banana
• [breaking change] Added contact chemical treatments
• Changed the dynamics of host growth
• Added the output contribution
• Updated documentation and vignettes

landsepi 1.2.2 (2022-10-06)

• [breaking change] Added sexual reproduction with gene recombination (thanks to Marta)
• [breaking change] loadDispersalPathogen() now return a list of two matrix, the first for clonal and the second for sexual reproductions
• Changed the mutation process
• Updated Shiny app
• Added a NEWS.md file to track changes to the package
• Updated documentation and vignettes

landsepi 1.1.0 (2021-07-26)

• Updated Shiny app
• Updated documentation & vignettes
• Added economic parameters and outputs

landsepi 1.0.1 (2020-07-02)

• [breaking change] Added simulation of real landscapes using shapefiles
• [breaking change] Created a Shiny app (thanks to Jean-Loup)
• Created vignettes (tutorials)
• Added multiple epidemiological and evolutionary outputs
• Added Adult Plant Resistance (APR) genes

landsepi 0.0.2 (2018-03-26)

• Creation of the package
• Parameterization for rusts of cereal crops

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.