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GDAL SQL

library(lazysf)

GDAL is a complex tool and there are many intricacies to using SQL with it.

We haven’t explored this comprehensively so feedback is very welcome.

OGRSQL

https://gdal.org/user/ogr_sql_dialect.html

Unfortunate label.

Real databases and file databases

PG, GPKG etc

https://gdal.org/user/sql_sqlite_dialect.html

Virtual SQL

shapefile, OpenFileGDB etc.

ESRI “Geodatabases”, known as ‘OpenFileGDB’ to GDAL are not real databases. Amazing! Sadly this means we cannot perform subquerys, which occurs with some contructs.

For example, this is fine - filter where on variables and then count the number of rows. There is only one ‘SELECT …’ statement.

## here f is a file path to the directory containing list_2d_building_polys_hobart from TheLIST opendata
lazysf(f) %>% filter(SHAPE_Area < 15) %>% tally() %>% show_query()
<SQL>
SELECT COUNT(*) AS "n"
FROM "list_2d_building_polys_hobart"
WHERE ("SHAPE_Area" < 15.0)

## we predicted this woud work, even on our not-a-database geodatabase
lazysf(f) %>% filter(SHAPE_Area < 15) %>% tally() %>% collect()
# A tibble: 1 x 1
      n
  <int>
1    56

However, if we do something more complex like a GROUP BY and then slice_min() we cannot run the query.

lazysf(f) %>% group_by(BUILD_TY) %>% slice_min(SHAPE_Area) %>% show_query()
<SQL>
SELECT "BUILD_ID", "BUILD_TY", "BUILD_NAME", "BLD_PUR", "MEAN_HGT", "UFI", "CREATED_ON", "LIST_GUID", "NOM_REG_NO", "SHAPE_Length", "SHAPE_Area", "SHAPE"
FROM (SELECT "BUILD_ID", "BUILD_TY", "BUILD_NAME", "BLD_PUR", "MEAN_HGT", "UFI", "CREATED_ON", "LIST_GUID", "NOM_REG_NO", "SHAPE_Length", "SHAPE_Area", "SHAPE", RANK() OVER (PARTITION BY "BUILD_TY" ORDER BY "SHAPE_Area") AS "q01"
FROM "list_2d_building_polys_hobart") "q01"
WHERE ("q01" <= 1)


lazysf(f) %>% group_by(BUILD_TY) %>% slice_min(SHAPE_Area)
Error in CPL_read_ogr(dsn, layer, query, as.character(options), quiet,  : 
  Query execution failed, cannot open layer.
In addition: Warning message:
In CPL_read_ogr(dsn, layer, query, as.character(options), quiet,  :

Even a simpler version slice_min() without grouping fails because it would be generating a subquery to do the work (this might change, but for now consider if you can re-imagine your query as something that will not require nested statements, or write it yourself.)

lazysf(f) %>% slice_min(SHAPE_Area) %>% show_query()
<SQL>
SELECT "BUILD_ID", "BUILD_TY", "BUILD_NAME", "BLD_PUR", "MEAN_HGT", "UFI", "CREATED_ON", "LIST_GUID", "NOM_REG_NO", "SHAPE_Length", "SHAPE_Area", "SHAPE"
FROM (SELECT "BUILD_ID", "BUILD_TY", "BUILD_NAME", "BLD_PUR", "MEAN_HGT", "UFI", "CREATED_ON", "LIST_GUID", "NOM_REG_NO", "SHAPE_Length", "SHAPE_Area", "SHAPE", RANK() OVER (ORDER BY "SHAPE_Area") AS "q01"
FROM "list_2d_building_polys_hobart") "q01"
WHERE ("q01" <= 1)

At worst, we can GROUP_BY and filter in the database and then sub select.

Note that this kind of query works on a “real database”, so consider relating your experiences to your friendly local data provider.

library(lazysf)
library(dplyr)
#> 
#> Attaching package: 'dplyr'
#> The following objects are masked from 'package:stats':
#> 
#>     filter, lag
#> The following objects are masked from 'package:base':
#> 
#>     intersect, setdiff, setequal, union
f <- system.file("gpkg/nc.gpkg", package = "sf", mustWork = TRUE)
#lazysf(f) %>% group_by(BIR74) %>% slice_min(PERIMETER) %>% show_query()


#lazysf(f) %>% group_by(BIR74) %>% slice_min(PERIMETER) %>% select(NAME, PERIMETER, geom) %>% st_as_sf()

Other things are less obvious, why doesn’t this work? The tally fails but filter/collect is fine

lazysf("C:/temp/temp.xlsx") %>% group_by(a) %>% tally() %>% show_query()
<SQL>
SELECT "a", COUNT(*) AS "n"
FROM "Encoding Time"
GROUP BY "a"


lazysf("C:/temp/temp.xlsx") %>% filter(d < 675868) %>% group_by(a) %>% collect()
# A tibble: 31 x 6
# Groups:   a [1]
   a               
....

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.