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This is a basic example which shows you how to search mammal names in Colombia using a vector of mammal names.
# define a vector with species to search for
splist <- c("Tapirus bairdii", "Tapirus pinchaque", "Tapirus terrestris",
"Tapirus terrestris", "Pudu mephistophiles", "Tapirus bairdii")
# search in database
search_mammalcol(splist)
mammalcol
has the ability to identify and correct minor
typos and lower case in the genus. Correcting potential typos or
variations in species names through fuzzy matching is a crucial aspect
of data management. This technique ensures precise retrieval by adeptly
identifying and accommodating minor differences in input names, thus
enhancing the reliability of analyses conducted on diverse,
inconsistent, and ensemble datasets.
The function mammalmap
produces basic a map of
distribution at the “Departamento” level for a single species.
Use the departamento name or a vector of departamentos to know the mammals species present. The argument type = “any” retrieve mammals present in any of those departamentos.
The argument type = “only” retrieves species present only in that departamento and in no other departamento.
The argument all retrieves species present in both departamentos. The argument taxa limit the search to one order. occ.bats shows the bats present in Arauca and Norte de Santander.
Lizcano, DJ. (2025). mammalcol: Access to the List of Mammal Species of Colombia. R package version 0.2.7
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.