The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

To acknowledge the use of 'medfate' package in your publications, please cite package version in the Zenodo repository (e.g., https://doi.org/10.5281/zenodo.7695331 ) and the scientific paper corresponding to the specific model you used. For simulations with transpirationMode = 'Granier' you should cite:

De Cáceres M, Martínez-Vilalta J, Coll L, Llorens P, Casals P, Poyatos R, Pausas J, Brotons L (2015). “Coupling a water balance model with forest inventory data to evaluate plant drought stress at the regional level.” Agricultural and Forest Meteorology, 213, 77-90. doi:10.1016/j.agrformet.2015.06.012.

For simulations with transpirationMode = 'Sperry' you should cite:

De Cáceres M, Mencuccini M, Martin-StPaul N, Limousin J, Coll L, Poyatos R, Cabon A, Granda V, Forner A, Valladares F, Martínez-Vilalta J (2021). “Unravelling the effect of species mixing on water use and drought stress in holm oak forests: a modelling approach.” Agricultural and Forest Meteorology, 296, 108233. doi:10.1016/j.agrformet.2020.108233.

For simulations with transpirationMode = 'Sureau' you should cite:

Ruffault J, Pimont F, Cochard H, Dupuy J, Nicolas M (2022). “SurEau-Ecos v2.0: a trait-based plant hydraulics model for simulations of plant water status and drought-induced mortality.” Geoscientific Model Development, 15, 5593–5626. doi:10.5194/gmd-15-5593-2022.

For simulations including carbon balance or forest dynamics you should cite:

De Cáceres M, Molowny-Horas R, Cabon A, Martínez-Vilalta J, Mencuccini M, García-Valdés R, Nadal-Sala D, Sabaté S, Martin-StPaul N, Morin X, D'Adamo F, Batllori E, Ameztegui A (2023). “MEDFATE 2.9.3: A trait-enabled model to simulate Mediterranean forest function and dynamics at regional scales.” Geoscientific Model Development, 16, 3165-2023. doi:10.5194/gmd-16-3165-2023.

Thank you for using 'medfate'

Corresponding BibTeX entries:

  @Article{,
    title = {Coupling a water balance model with forest inventory data
      to evaluate plant drought stress at the regional level},
    author = {Miquel {De Cáceres} and Jordi Martínez-Vilalta and Lluís
      Coll and Pilar Llorens and Pere Casals and Rafael Poyatos and
      Juli Pausas and Lluís Brotons},
    journal = {Agricultural and Forest Meteorology},
    year = {2015},
    volume = {213},
    pages = {77-90},
    doi = {10.1016/j.agrformet.2015.06.012},
  }
  @Article{,
    title = {Unravelling the effect of species mixing on water use and
      drought stress in holm oak forests: a modelling approach},
    author = {Miquel {De Cáceres} and Maurizio Mencuccini and Nicolas
      Martin-StPaul and Jean-Marc Limousin and Lluís Coll and Rafael
      Poyatos and Antoine Cabon and Victor Granda and Alicia Forner and
      Fernando Valladares and Jordi Martínez-Vilalta},
    journal = {Agricultural and Forest Meteorology},
    year = {2021},
    volume = {296},
    pages = {108233},
    doi = {10.1016/j.agrformet.2020.108233},
  }
  @Article{,
    title = {SurEau-Ecos v2.0: a trait-based plant hydraulics model for
      simulations of plant water status and drought-induced mortality},
    author = {Julien Ruffault and François Pimont and Hervé Cochard and
      Jean-Luc Dupuy and Martin-StPaul Nicolas},
    journal = {Geoscientific Model Development},
    year = {2022},
    volume = {15},
    pages = {5593–5626},
    doi = {10.5194/gmd-15-5593-2022},
  }
  @Article{,
    title = {MEDFATE 2.9.3: A trait-enabled model to simulate
      Mediterranean forest function and dynamics at regional scales},
    author = {Miquel {De Cáceres} and Roberto Molowny-Horas and Antoine
      Cabon and Jordi Martínez-Vilalta and Maurizio Mencuccini and Raúl
      García-Valdés and Daniel Nadal-Sala and Santiago Sabaté and
      Nicolas Martin-StPaul and Xavier Morin and Francesco D'Adamo and
      Enric Batllori and Aitor Ameztegui},
    journal = {Geoscientific Model Development},
    year = {2023},
    volume = {16},
    pages = {3165-2023},
    doi = {10.5194/gmd-16-3165-2023},
  }

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.