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minSNPs Package

For manual, see here.

This is a rebuilt version of minSNPs. Its functionality is similar to the original repository, but has cleaner code and less dependencies.

The package has a dependency that is not in CRAN, but in BioC. In order for R to install that, you need to enable BioC repository, this can be done by running setRepositories() and selecting both CRAN & BioC Software.

This is a simple install script for R packages:

if (!require("minSNPs", quietly = TRUE)){
  if (!require("BiocParallel", quietly = TRUE)){
    if (!require("BiocManager", quietly = TRUE)){
      install.packages("BiocManager")
    }
    BiocManager::install("BiocParallel")
  }
  install.packages("minSNPs")
}

See standard workflow or standard workflow in Google colab for quick start.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.