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pca.outlier
: add prefix to ellipse to avoid conflict
with package car.corrgram.circle
and corrgram.ellipse
: move
‘scales’ into argument list.cl.auc
: adjust auc:
if (auc < 0.5) auc <- 1 - auc
accest
: Fix bugs and add more output.cl.roc
: change output and fix bugs.cl.roc
: add output of positive level.cl.perf
: add confusion matrix, Kappa and positive
outputs.plsc
: minor changes for returned component pls.out so
that R2 can be applied.plslda
: minor changes for returned component pls.out so
that R2 can be applied.classifier
: bugs fixdf.summ
: add dots argument and modify an user-defined
function.stats.vec
and stats.mat
: summarising two
groups stats, such as p-values.fs.cl.2
, perf
and perf.aam
:
internal functions (21-01-2014).shrink.list
proprec.auto
as hidden function and tidy uppval.reject
: add na.rm = TRUE.grpplot
: remove xlab and ylab inside.mdsplot
and mds_plot_wrap
for MDS plotting.panel.elli
and
panel.elli.1
panel.outl
for labelling data points outside
ellipse. They can be considered as outliers..path.package
is defunct so use
path.package
instead in csv2xls
.pls:::coef.mvr
replace coef.mvr
since
it hides in the new version of ‘pls’.stats.mat
and
stats.vec
.stats.mat
only.pca.outlier
and
pca.outlier.1
. The former is lattice version and the later
is the basic graphics version.stats.vec
and
stats.mat
. So the results are numeric, not character.melt
and ddply
with base R
functions. So no need to load two packages reshape
and
plyr
.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.