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omock 0.7.0
- Deprecated
mockConcepts() because it creates
placeholder concept rows that may be mistaken for real OMOP vocabulary
content. Use mockCdmReference(vocabularySet = "eunomia"),
mockVocabularyTables(), or
subsetVocabularyTables() instead.
changeCdmVersion() now uses
omopgenerics::compareOmopTableFields() and aligns local
OMOP tables to the target CDM version fields.
mockCdmFromDataset() now validates
cdmVersion and converts loaded datasets to the requested
CDM version when needed.
- Downloaded mock datasets within 99.99% of their expected size are
now reused; users are only asked to delete a dataset when it appears
incomplete.
- Mock dataset CDM names now resolve to a downloadable dataset version
before download, avoiding invalid URL errors when a requested target CDM
version is not directly hosted.
omock 0.6.2
omock 0.6.1
New Features and
Improvements
- Improved dataset downloads with retry logic and timeout handling for
more reliable fetching.
- Updated mock dataset URLs to a new storage location and improved
join logic.
- Enhanced mock CDM examples, including clearer error handling and
more robust behaviour.
- Added an internal GI Bleed dataset, along with the associated
loading logic, for expanded example coverage.
Bug Fixes
- Removed unused input validation and table-checking functions to
simplify the codebase.
- Fixed the placement of rows_to_keep calculation in mockCohort to
ensure correct behaviour.
omock 0.6.0
New Features and
Improvements
- Added new vignettes and updated to omopgenerics 1.3.1 #184
- Introduced support for
mockCdmFromTables() #196
- Added re-exported functions from
omopgenerics for
improved usability #198
- Added warning messages in
mockCohort() for clearer user
feedback #197
- Added
visit_detail mock table support #224
- Added function to change CDM version from 5.3 to 5.4 #221
Updates and Maintenance
- Updated citation and badge information #195
- Updated
drugStrength from RDS source #194
- General updates and internal refinements #207
- Replaced deprecated
lubridate usage with
clock for date-time handling #222
Bug Fixes
- Fixed handling of concepts not in OMOP tables #199
- Fixed vocabulary set retrieval issues #209
- Fixed concept type ID handling #208
- Fixed download truncation issues #212
- Fixed other minor bugs #192 #200
omock 0.5.0
- add option source to
mockCdmFromDataset by @catalamarti #158
omock 0.4.0
- Add contributing guidlines by @ilovemane in #152
- Speed up start and end dates by @catalamarti in #150
- Speed up mockObservationPeriod.R by @ilovemane in #153
- Add mock datasets by @catalamarti in #154
- Speed up mockCohort.R by @ilovemane in #156
- Test mock datasets creation by @catalamarti in #155
omock 0.3.2
omock 0.3.1
omock 0.3.0
omock 0.2.0
omock 0.1.0
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.