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pQTLdata: A Collection of Proteome Panels and Meta-Data

It aggregates protein panel data and metadata for protein quantitative trait locus (pQTL) analysis using 'pQTLtools' (<https://jinghuazhao.github.io/pQTLtools/>). The package includes data from affinity-based panels such as 'Olink' (<https://olink.com/>) and 'SomaScan' (<https://somalogic.com/>), as well as mass spectrometry-based panels from 'CellCarta' (<https://cellcarta.com/>) and 'Seer' (<https://seer.bio/>). The metadata encompasses updated annotations and publication details.

Version: 0.5
Depends: R (≥ 3.5.0)
Imports: knitr, Rdpack
Suggests: dplyr, grid, EnsDb.Hsapiens.v75, ensembldb, IRanges, org.Hs.eg.db, S4Vectors, VennDiagram
Published: 2025-03-07
DOI: 10.32614/CRAN.package.pQTLdata
Author: Jing Hua Zhao ORCID iD [aut, cre] (0000-0003-4930-3582), Uwe Ligges [ctb], Benjamin Altmann [ctb]
Maintainer: Jing Hua Zhao <jinghuazhao at hotmail.com>
License: MIT + file LICENSE
URL: https://jinghuazhao.github.io/pQTLdata/, https://jinghuazhao.github.io/pQTLdata/
NeedsCompilation: no
Materials: README NEWS
CRAN checks: pQTLdata results

Documentation:

Reference manual: pQTLdata.pdf
Vignettes: pQTLdata (source, R code)

Downloads:

Package source: pQTLdata_0.5.tar.gz
Windows binaries: r-devel: not available, r-release: pQTLdata_0.5.zip, r-oldrel: not available
macOS binaries: r-devel (arm64): not available, r-release (arm64): not available, r-oldrel (arm64): not available, r-devel (x86_64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

Please use the canonical form https://CRAN.R-project.org/package=pQTLdata to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.