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Tools to sort, edit and prune pedigrees and to extract the inbreeding coefficients and the relationship matrix (includes code for pedigrees from self-pollinated species). The use of pedigree data is central to genetics research within the animal and plant breeding communities to predict breeding values. The relationship matrix between the individuals can be derived from pedigree structure ('Vazquez et al., 2010') <doi:10.2527/jas.2009-1952>.
| Version: | 0.3 |
| Depends: | R (≥ 3.0.0), methods |
| Imports: | Matrix (≥ 1.0) |
| Published: | 2024-10-12 |
| DOI: | 10.32614/CRAN.package.pedigreeTools |
| Author: | Ana Ines Vazquez [aut], Douglas Bates [aut], Siddharth Avadhanam [aut], Paulino Perez Rodriguez [aut, cre], Gregor Gorjanc [ctb] |
| Maintainer: | Paulino Perez Rodriguez <perpdgo at colpos.mx> |
| License: | GPL-3 |
| URL: | https://github.com/Rpedigree/pedigreeTools/ |
| NeedsCompilation: | yes |
| Materials: | ChangeLog |
| CRAN checks: | pedigreeTools results |
| Reference manual: | pedigreeTools.pdf |
| Package source: | pedigreeTools_0.3.tar.gz |
| Windows binaries: | r-devel: pedigreeTools_0.3.zip, r-release: pedigreeTools_0.3.zip, r-oldrel: pedigreeTools_0.3.zip |
| macOS binaries: | r-release (arm64): pedigreeTools_0.3.tgz, r-oldrel (arm64): pedigreeTools_0.3.tgz, r-release (x86_64): pedigreeTools_0.3.tgz, r-oldrel (x86_64): pedigreeTools_0.3.tgz |
| Old sources: | pedigreeTools archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.