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pepr package: Portable Encapsulated Projects in Rpepr is an R package for reading Portable Encapsulated Projects, or
PEPs, in R. If you describe your project (configuration
and samples) according to this format, you can load all project metadata
into R using the pepr package. To test pepr,
you can try loading one of the example PEPs.
Complete documentation and API for the pepr R package is
at code.databio.org/pepr.
Install from CRAN:
install.packages("pepr")Load a project and explore metadata like this:
library("pepr")
cfgPath = system.file(
"extdata",
"example_peps-master",
"example_basic",
"project_config.yaml",
package = "pepr"
)
p = Project(file = cfgPath)
sampleTable(p)
config(p)These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.