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pepr
package: Portable Encapsulated Projects in Rpepr
is an R package for reading Portable Encapsulated Projects, or PEPs, in R. If you describe your project (configuration and samples) according to this format, you can load all project metadata into R using the pepr
package. To test pepr
, you can try loading one of the example PEPs.
Complete documentation and API for the pepr
R package is at code.databio.org/pepr.
Install from CRAN:
Load a project and explore metadata like this:
library("pepr")
cfgPath = system.file(
"extdata",
"example_peps-master",
"example_basic",
"project_config.yaml",
package = "pepr"
)
p = Project(file = cfgPath)
sampleTable(p)
config(p)
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.