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The R package, perutimber, provides easy access to
taxonomic information for over 1,300 vascular plant species found in the
“Catalogue of the timber forest species of the Amazon and the
Peruvian Yunga”. This package is based on the authoritative
publication by Vásquez
Martínez and Rojas Gonzáles (2022) titled “Catálogo de las especies
forestales maderables de la Amazonía y la Yunga Peruana” in Revista
Forestal del Perú 37(3, Número Especial): 5-138. With
perutimber, researchers and enthusiasts alike can
efficiently explore and analyze the timber plant species.
You can install the development version of perutimber
like so:
pak::pak("PaulESantos/perutimber")library(perutimber)
sps_list <- c("Pentaplaris davidsmithii",
"Quararibea wittiia",
"Sterculia tessmanni",
"Sterculia tessmannia",
"Brosimum alicastrum subsp. bolivarense",
"Brosimum alicastrum sub bolivarense",
"Poa annua")perutimber::search_perutimber function can be used over
a vector of species names. You can pass a character vector containing
multiple species names as an argument to the function, and it will check
whether each of those species names is listed in the data. The function
will return a character vector indicating whether each species name is
present or not. Here’s an example:perutimber::search_perutimber(splist = sps_list)
#> [1] "Present" "P_updated_name" "P_updated_name" "P_updated_name"
#> [5] "Present" "P_updated_name" ""perutimber::search_perutimber can be used with a
data.frame or tibble. Here’s an example of how to use it: # base R
sps_df <- data.frame(sps_list)
sps_df
#> sps_list
#> 1 Pentaplaris davidsmithii
#> 2 Quararibea wittiia
#> 3 Sterculia tessmanni
#> 4 Sterculia tessmannia
#> 5 Brosimum alicastrum subsp. bolivarense
#> 6 Brosimum alicastrum sub bolivarense
#> 7 Poa annua
sps_df$review <- perutimber::search_perutimber(splist = sps_list)
sps_df
#> sps_list review
#> 1 Pentaplaris davidsmithii Present
#> 2 Quararibea wittiia P_updated_name
#> 3 Sterculia tessmanni P_updated_name
#> 4 Sterculia tessmannia P_updated_name
#> 5 Brosimum alicastrum subsp. bolivarense Present
#> 6 Brosimum alicastrum sub bolivarense P_updated_name
#> 7 Poa annua
# tidyverse - tibble
sps_tbl <- tibble::tibble(sps_list)
sps_tbl |>
dplyr::mutate(review = perutimber::search_perutimber(splist = sps_list))
#> # A tibble: 7 × 2
#> sps_list review
#> <chr> <chr>
#> 1 Pentaplaris davidsmithii "Present"
#> 2 Quararibea wittiia "P_updated_name"
#> 3 Sterculia tessmanni "P_updated_name"
#> 4 Sterculia tessmannia "P_updated_name"
#> 5 Brosimum alicastrum subsp. bolivarense "Present"
#> 6 Brosimum alicastrum sub bolivarense "P_updated_name"
#> 7 Poa annua ""perutimber::get_perutimber_data() allows access to
information provided in the “Catalogue of the timber forest species of
the Amazon and the Peruvian Yunga”, to obtain information for a specific
species, a species name vector must be provided as input. The function
returns a data frame containing basic information for each species, such
as its common and scientific names.perutimber::get_perutimber_data(sps_list)
#> names_submitted accepted_name
#> 1 Pentaplaris davidsmithii Pentaplaris davidsmithii
#> 2 Quararibea wittiia Quararibea wittii
#> 3 Sterculia tessmanni Sterculia tessmannii
#> 4 Sterculia tessmannia Sterculia tessmannii
#> 5 Brosimum alicastrum subsp. bolivarense Brosimum alicastrum subsp. bolivarense
#> 6 Brosimum alicastrum sub bolivarense Brosimum alicastrum subsp. bolivarense
#> accepted_name_author accepted_family
#> 1 Dorr & C. Bayer Malvaceae
#> 2 K. Schum. & Ulbr. Malvaceae
#> 3 Mildbr. Malvaceae
#> 4 Mildbr. Malvaceae
#> 5 (Pittier) C.C. Berg Moraceae
#> 6 (Pittier) C.C. Berg Moraceae
#> common_name accepted_name_rank habit
#> 1 Ojoso blanco species Árbol
#> 2 Huayhuash sapote, Sapotillo species Árbol
#> 3 Sapote del monte species Árbol
#> 4 Sapote del monte species Árbol
#> 5 Congona, Machinga, Palo leche, Rama pama, Tamamuri subspecies Árbol
#> 6 Congona, Machinga, Palo leche, Rama pama, Tamamuri subspecies Árbol
#> plant_height_m regions elevation_m uses
#> 1 25-35(-40) m. JU. 100-1000 con aptitud maderable
#> 2 10-25 m. LO, MD, SM, UC. 100-500 con aptitud maderable
#> 3 15-25 m. AM, LO, MD, PA, UC. 100-500 madera aserrada
#> 4 15-25 m. AM, LO, MD, PA, UC. 100-500 madera aserrada
#> 5 20-30(-35) m. AM, LO, MD. 100-500(-1500) maderable - madera aserrada
#> 6 20-30(-35) m. AM, LO, MD. 100-500(-1500) maderable - madera aserradaThese binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.