The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
The spatial interpolation of genetic distances between samples is based on a modified kriging method that accepts a genetic distance matrix and generates a map of probability of lineage presence. This package also offers tools to generate a map of potential contact zones between groups with user-defined thresholds in the tree to account for old and recent divergence. Additionally, it has functions for IDW interpolation using genetic data and midpoints.
| Version: | 2.0.2 |
| Suggests: | geometry, raster, gdistance |
| Published: | 2019-12-12 |
| DOI: | 10.32614/CRAN.package.phylin |
| Author: | Pedro Tarroso, Guillermo Velo-Anton, Silvia Carvalho |
| Maintainer: | Pedro Tarroso <ptarroso at cibio.up.pt> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://www.r-project.org, https://github.com/ptarroso/phylin |
| NeedsCompilation: | no |
| Citation: | phylin citation info |
| In views: | MissingData |
| CRAN checks: | phylin results |
| Reference manual: | phylin.pdf |
| Vignettes: |
Phylin: a step-by-step tutorial Phylin with resistance |
| Package source: | phylin_2.0.2.tar.gz |
| Windows binaries: | r-devel: phylin_2.0.2.zip, r-release: phylin_2.0.2.zip, r-oldrel: phylin_2.0.2.zip |
| macOS binaries: | r-release (arm64): phylin_2.0.2.tgz, r-oldrel (arm64): phylin_2.0.2.tgz, r-release (x86_64): phylin_2.0.2.tgz, r-oldrel (x86_64): phylin_2.0.2.tgz |
| Old sources: | phylin archive |
Please use the canonical form https://CRAN.R-project.org/package=phylin to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.