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Estimates DNA target concentration by classifying digital PCR (polymerase chain reaction) droplets as positive, negative, or rain, using Expectation-Maximization Clustering. The fitting is accomplished using the 'EMMIXskew' R package (v. 1.0.3) by Kui Wang, Angus Ng, and Geoff McLachlan (2018) as based on their paper "Multivariate Skew t Mixture Models: Applications to Fluorescence-Activated Cell Sorting Data" <doi:10.1109/DICTA.2009.88>.
| Version: | 0.1.1.1 |
| Depends: | graphics, stats, methods, grDevices, R (≥ 2.10) |
| Imports: | mvtnorm |
| Published: | 2021-03-09 |
| DOI: | 10.32614/CRAN.package.popPCR |
| Author: | Joyce Emlyn Guiao [aut, cre] |
| Maintainer: | Joyce Emlyn Guiao <joyce_emlyn_guiao at dlsu.edu.ph> |
| License: | GPL (≥ 3) |
| NeedsCompilation: | yes |
| Materials: | README |
| In views: | Omics |
| CRAN checks: | popPCR results |
| Reference manual: | popPCR.pdf |
| Package source: | popPCR_0.1.1.1.tar.gz |
| Windows binaries: | r-devel: popPCR_0.1.1.1.zip, r-release: popPCR_0.1.1.1.zip, r-oldrel: popPCR_0.1.1.1.zip |
| macOS binaries: | r-release (arm64): popPCR_0.1.1.1.tgz, r-oldrel (arm64): popPCR_0.1.1.1.tgz, r-release (x86_64): popPCR_0.1.1.1.tgz, r-oldrel (x86_64): popPCR_0.1.1.1.tgz |
| Old sources: | popPCR archive |
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These binaries (installable software) and packages are in development.
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