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build_datalist() now works correctly with data.table
datasets. (#34, #35, h/t Dan Schrage)build_datalist() dropped factor levels when replacing a
factor variable. (#39, h/t Tomasz Żółtak)find_data() now respects subset and
na.actions arguments for svyglm() models.
(#37, h/t Tomasz Żółtak)prediction_glm with the
data argument (Issue #32).find_data() and
prediction.lm() to check for correct behavior in the
presence of missing data (na.action) and
subset arguments. (#28)margex, borrowed from Stata’s
identically named data.summary(prediction(...)) now reports variances of
average predictions, along with test statistics, p-values, and
confidence intervals, where supported. (#17)prediction_summary() which simply
calls summary(prediction(...)).prediction.bigglm() method (from
biglm) due to failing tests. (#25)stats::poly()
rather than just poly() in model formulae. (#22)prediction.glmnet() method for “glmnet” objects
from glmnet. (#1)prediction.merMod() gains an re.form
argument to pass forward to predict.merMod().prediction.glmML() method for “glimML” objects
from aod. (#1)prediction.glmQL() method for “glimQL” objects
from aod. (#1)prediction.truncreg() method for “truncreg”
objects from truncreg. (#1)prediction.bruto() method for “bruto” objects
from mda. (#1)prediction.fda() method for “fda” objects from
mda. (#1)prediction.mars() method for “mars” objects from
mda. (#1)prediction.mda() method for “mda” objects from
mda. (#1)prediction.polyreg() method for “polyreg” objects
from mda. (#1)prediction.speedglm() and
prediction.speedlm() methods for “speedglm” and “speedlm”
objects from speedglm. (#1)prediction.bigLm() method for “bigLm” objects
from bigFastlm. (#1)prediction.biglm() and
prediction.bigglm() methods for “biglm” and “bigglm”
objects from biglm, including those based by
"ffdf" from ff. (#1)build_datalist(). The
function now returns an an at_specification attribute,
which is a data frame representation of the at
argument.prediction.gam() is now
prediction.Gam() for “Gam” objects from
gam. (#1)prediction.train() method for “train” objects
from caret. (#1)at argument in build_datalist() now
accepts a data frame of combinations for limiting the set of
levels.prediction() methods gain a (experimental)
calculate_se argument, which regulates whether to calculate
standard errors for predictions. Setting to FALSE can
improve performance if they are not needed.build_datalist() gains an as.data.frame
argument, which - if TRUE - returns a stacked data frame
rather than a list. This argument is now used internally in most
prediction() functions in an effort to improve performance.
(#18)summary.prediction() method to interact with
the average predicted values that are printed when
at != NULL.prediction.knnreg() method for “knnreg” objects
from caret. (#1)prediction.gausspr() method for “gausspr” objects
from kernlab. (#1)prediction.ksvm() method for “ksvm” objects from
kernlab. (#1)prediction.kqr() method for “kqr” objects from
kernlab. (#1)prediction.earth() method for “earth” objects
from earth. (#1)prediction.rpart() method for “rpart” objects
from rpart. (#1)mean_or_mode.data.frame() and
median_or_mode.data.frame() methods.prediction.zeroinfl() method for “zeroinfl”
objects from pscl. (#1)prediction.hurdle() method for “hurdle” objects
from pscl. (#1)prediction.lme() method for “lme” and “nlme”
objects from nlme. (#1)prediction.merMod().prediction.plm() method for “plm” objects from
plm. (#1)CONTRIBUTING.md to reflect expected test-driven
development.prediction.mnp() method for “mnp” objects from
MNP. (#1)prediction.mnlogit() method for “mnlogit” objects
from mnlogit. (#1)prediction.gee() method for “gee” objects from
gee. (#1)prediction.lqs() method for “lqs” objects from
MASS. (#1)prediction.mca() method for “mca” objects from
MASS. (#1)prediction.glm() method.
(#1)category argument to prediction()
methods for models of multilevel outcomes (e.g., ordered probit, etc.)
to be dictate which level is expressed as the "fitted"
column. (#14)at argument to prediction()
methods. (#13)mean_or_mode() and median_or_mode()
S3 generics.mean_or_mode() and
median_or_mode() where incorrect factor levels were being
returned.prediction.princomp() method for “princomp”
objects from stats. (#1)prediction.ppr() method for “ppr” objects from
stats. (#1)prediction.naiveBayes() method for “naiveBayes”
objects from e1071. (#1)prediction.rlm() method for “rlm” objects from
MASS. (#1)prediction.qda() method for “qda” objects from
MASS. (#1)prediction.lda() method for “lda” objects from
MASS. (#1)find_data() now respects the subset
argument in an original model call. (#15)find_data() now respects the na.action
argument in an original model call. (#15)find_data() now gracefully fails when a model is
specified without a formula. (#16)prediction() methods no longer add a “fit” or “se.fit”
class to any columns. Fitted values are identifiable by the column name
only.build_datalist() now returns at value
combinations as a list.prediction.nnet() method for “nnet” and
“multinom” objects from nnet. (#1)prediction() methods now return the value of
data as part of the response data frame. (#8, h/t Ben
Whalley)find_data() methods for
"crch" and "hxlr". (#5)prediction.glmx() and
prediction.hetglm() methods for “glmx” and “hetglm” objects
from glmx. (#1)prediction.betareg() method for “betareg” objects
from betareg. (#1)prediction.rq() method for “rq” objects from
quantreg. (#1)prediction.gam() method for “gam” objects from
gam. (#1)prediction() and find_data() methods
for "crch" "hxlr" objects from
crch. (#4, h/t Carl Ganz)prediction() and find_data() methods
for "merMod" objects from lme4. (#1)seq_range() function from
margins to prediction.build_datalist() function from
margins to prediction. This will
simplify the ability to calculate arbitrary predictions.prediction.svm() method for objects of class
"svm" from e1071. (#1)prediction.polr() when attempting to
pass a type argument, which is always ignored. A warning is
now issued when attempting to override this.mean_or_mode() and median_or_mode()
functions, which provide a simple way to aggregate a variable of factor
or numeric type. (#3)prediction() methods for various time-series
model classes: “ar”, “arima0”, and “Arima”.find_data() is now a generic, methods for “lm”, “glm”,
and “svyglm” classes. (#2, h/t Carl Ganz)These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.