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rCNV 1.3.0 (third update)

• parallelization enabled
• dupValidate function revised
• per site Fis added to deviant detection
• vstPermutation function added
• maf modified to remove multi-allelic sites
• FIT correction added

rCNV 1.2.0 (second update)

• relatedness function optimized
• bugs fixed in cpm.normal function
• bugs fixed in the sig.het function
• new publication added
• web page updated

rCNV 1.1.0 (first update)

Changes

• sig.het function is 10x faster
• dupGet function categorizes SNPs into deviants and non-deviants not duplicates and singlets
• The new function cnv categorizes deviant SNPs to CNVs using the given statistical approaches or using unsupervised clustering
• minor issues of chi-square and Z-score calculations are fixed
• allele.info calculates excess of heterozygotes in addition to Z-score and chi-square values
• sig.hets function also accepts allele depth table for input
• new function added ‘power.bias’ to plot detection bias from simulations
• webpage updated to match the changes

rCNV 1.0.0 (Release date: 29/03/2022)

Changes

• All the major functions completed
• bugs fixed
• Website updated
• this is the first release of the package

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.