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raptr 1.0.1
- Fix usage sections in documentation.
- Fix missing braces in documentation.
- Fix aliasing for package manual entry (#15).
raptr 1.0.0
- The package has been overhauled to support modern spatial data structures. Specifically, sf package objects (
sf::st_sf()
) are now use for vector data and terra package objects (terra::rast()
) for raster data. These updates impact many of the user-facing functions (e.g., calcBoundaryData()
, sim.species()
, sim.space()
, calcSpeciesAverageInPus()
, rap()
), so users will likely need to update their code.
- The
cs_pus
, cs_spp
, and cs_spaces
built-in datasets have been removed. This is because terra::rast()
objects cannot be distributed as built-in datasets for packages. These datasets can now be manually imported from external files distributed with the package (see ?cs_pus
for more details).
- Remove rgdal and rgeos packages as dependencies (#13).
- Support for the raster package has been deprecated.
- The
SpatialPolygons2PolySet
function has been renamed to convert2PolySet
.
- Update citation format.
- Update package startup message.
- Update C++ specification to C++14.
- Update examples and unit tests.
raptr 0.2.2.0
- Add
NumericFocus
parameter to GurobiOpts
to handle numerical issues.
- Update
spacePlot
to avoid throwing a ggplot2 deprecation warning.
raptr 0.2.1
- CRAN release.
- Update Gurobi documentation URLs.
raptr 0.2.0.0
- The data simulation function has been updated such that the RandomFields package is no longer a dependency.
- The
sim.space
and sim.species
functions no longer accept RandomFileds objects as arguments. To simulate spatially auto-correlated data using random fields, a numeric
value should be supplied to the model
parameter.
- Small tweaks to case study in vignette.
raptr 0.1.8.0
- The RandomFields and RgoogleMaps R packages are now optional dependencies.
- Minimum supported versions are now specified for most dependencies.
- The
verbose
parameter of solve()
can now be used to suppress output from the Gurobi solver.
- Fix compatibility issues with updates to the ggplot2 package.
- Fix note during package checks related to the rgdal package.
raptr 0.1.7.3
- Update example datasets and
make.RapData
function to improve compatibility with updates to coordinate reference system (sp::CRS
) objects. These updates simply mean that warning messages will no longer be displayed. The compatibility issues that resulted in warnings did not affect the correctness of any results.
raptr 0.1.7.2
- Fix compatibility issues between the testthat R package and the gurobi R package in package tests.
raptr 0.1.7.1
- Implement GitHub Actions continuous integration (i.e. update tests and README).
raptr 0.1.7
- Remove support for processing data using GDAL.
- Remove
is.gdalInstalled
and rasterizeGDAL
functions.
- Update Spatial-class objects with updated
sp::CRS()
class definition
raptr 0.1.6.1
- Fix “Non-file package-anchored link(s) in documentation object” warnings in R-devel checks.
raptr 0.1.6
- Fix errors in R-devel CRAN checks due changes in
is.finite
behaviour for character
class objects.
- Fix WorldClim URLs.
raptr 0.1.5
- Fix warnings in R-devel CRAN checks related to documentation.
- Fix broken link in vignette.
raptr 0.1.4
- Retain debugging symbols to conform with CRAN policies.
raptr 0.1.3
- Fix bug that caused the R session to crash when none of the planning units associated with an attribute space were selected in a manually specified solution. Now the space-held calculations will return a negative infinity value in such cases.
- Permit attribute spaces to have a single demand point.
raptr 0.1.2
- Fix compatibility issues with demand point examples and hypervolume R package (version 2.0.10).
- Update package citation.
- Removed rgurobi R package dependency because the gurobi R package (version 8.0.0+) provides the functionality to access solutions from the solution pool.
- Multiple solutions can now be generated using the three different search pool methods provided Gurobi.
- Permit a zero MIPGAP in argument to
GurobiOpts
.
- The
print.RapResults
function now prints information in a prettier manner.
- The
raptr::solve
function now throws a warning if some species are poorly represented in the solution.
raptr 0.1.1
- Vignette size has been reduced.
- Updated DOI in README.
raptr 0.1.0
- Unit tests now compatible with testthat R package (version 1.0.2.9000).
- The assertthat R package is now used for validating function arguments.
- Vignette now uses
knitr::rmarkdown_notangle
engine to avoid running the code during package checks, and placeholder vignette file has been removed.
- Code has been linted.
- Functions from other packages are now called explicitly using
pkg::function
.
- Messages are now displayed using
message
following best practices.
- Updated readme.
- Added citation for Methods in Ecology and Evolution paper.
- Strip debugging symbols from compiled files to reduce installation size.
- The
is.GurobiInstalled
now does not run gurobi to avoid spurious notes during CRAN checks on academic license.
raptr 0.0.5
- Fix documentation in
make.DemandPoints
.
- Use
\donttest
instead of \dontrun
for examples.
- Fix broken example code.
raptr 0.0.4
- Find out which suggested packages are installed using
requireNamespace
.
- Add more links to package documentation.
- Register Rcpp functions.
raptr 0.0.3
- Reduce memory consumption using external pointers.
- Fix memory leaks.
- Fix bug in tests for
calcSpeciesAverageInPus
.
raptr 0.0.2
- Reduce installation size.
- Fix typo in README.
raptr 0.0.1.1
- Fixed authorship typo.
- Updated README with instructions for installing from CRAN.
raptr 0.0.1
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.