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Meta-analysis is widely used to summarize estimated effects sizes across multiple statistical tests. Standard fixed and random effect meta-analysis methods assume that the estimated of the effect sizes are statistically independent. Here we relax this assumption and enable meta-analysis when the correlation matrix between effect size estimates is known. Fixed effect meta-analysis uses the method of Lin and Sullivan (2009) <doi:10.1016/j.ajhg.2009.11.001>, and random effects meta-analysis uses the method of Han, et al. <doi:10.1093/hmg/ddw049>.
Version: | 0.0.18 |
Depends: | R (≥ 3.6.0), ggplot2, methods |
Imports: | mvtnorm, grid, reshape2, compiler, Rcpp, EnvStats, Rdpack, stats |
LinkingTo: | Rcpp, RcppArmadillo |
Suggests: | knitr, RUnit, clusterGeneration, metafor |
Published: | 2024-02-08 |
DOI: | 10.32614/CRAN.package.remaCor |
Author: | Gabriel Hoffman [aut, cre] |
Maintainer: | Gabriel Hoffman <gabriel.hoffman at mssm.edu> |
BugReports: | https://github.com/DiseaseNeurogenomics/remaCor/issues |
License: | Artistic-2.0 |
URL: | https://diseaseneurogenomics.github.io/remaCor/ |
NeedsCompilation: | yes |
Citation: | remaCor citation info |
Materials: | README NEWS |
In views: | MetaAnalysis |
CRAN checks: | remaCor results |
Reference manual: | remaCor.pdf |
Vignettes: |
remaCor: Random effects meta-analysis for correlated test statistics |
Package source: | remaCor_0.0.18.tar.gz |
Windows binaries: | r-devel: remaCor_0.0.18.zip, r-release: remaCor_0.0.18.zip, r-oldrel: remaCor_0.0.18.zip |
macOS binaries: | r-release (arm64): remaCor_0.0.18.tgz, r-oldrel (arm64): remaCor_0.0.18.tgz, r-release (x86_64): remaCor_0.0.18.tgz, r-oldrel (x86_64): remaCor_0.0.18.tgz |
Old sources: | remaCor archive |
Reverse imports: | dreamlet, variancePartition |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.