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build_secuTrial_url() now has optional parameter
prefix with default "apps/WebObjects/".
(#263)\" (#220, #261)
read_export_options() now also reads enclosure
character from header.print.secuTrialoptions() now also prints enclosure
character. Quote and Tabulator are now printed as '\"' and
'\t' rather than '"' and
' '.read_export_table() now uses
readr::read_delim() with options
escape_backslash = TRUE and
quote = export_options$quoteread_export_table() to read_secuTrial_raw()
(one warning per export file instead of several warnings for each
table)read_export_options() now reads only the first 10 lines
to find the encoding. Reading all lines would fail if the export options
were ISO-8859 encoded and contained ‘problematic’ characaters, e.g. in
center names.encoding option in
plot_recruitment(): Not needed here, as centres are read
with correct encoding in read_secuTrial_raw() and stored in
the secuTrialR object.write_secuTrial() no longer allows
format = "sas" due to deprecation of write_sas in
haven (version 2.5.2).read_secuTrial_raw now produces a more explicit warning
when ISO-8859 encoding is used. Recent changes in R seem to have reduced
compatibility with this encoding.pat_id variableas.data.frame.secuTrialData() to allow named
character vectors as option data.frames to specify custom
names for data.frames (#250)read_export_table etc allowing
passing other options to read.table (#240)dictionary_secuTrial function for easy
access a data dictionary (#241)formtablename added to the output of
visit_structure for better reference between the table
names and labels (#242)export_date and
export_datetime for easier access to the export date (and
time) (#246)read_export_options() to work with exports from
new secuTrial version (6.1.2.5 - 6.3.2.5) (#245)Maintainer tag to
Alan Haynesfactorize_secuTrial() back to 1.0.3 version
due to problems with lookup table factorization (#224)tcltk and igraph dependency to
suggested (#223)skip parameter to
read_validation_overview() (#212)subset_secuTrial() would drop labels
during the subsetting process (#203)dates_secutrial() and factorize_secutrial()
(#204)read_secuTrial() failure
message (#187)project_setup in
visit_structure() (#181)export_options (#182)annual_recruitment() and
return_random_participants() (#182)return_random_participants() (#151)read_secuTrial() to
indicate that the problem could be a rectangular export file (#168)export_options (#171)return_hidden_items() function (#172)label_secuTrial()label_secuTrial()print.secuTrialdata is now wrapped at 80
characterssecutrialoptions class is now
secuTrialoptions.plot() function for
secuTrialdata objects. (#139)read_secuTrial() and read_secuTrial_raw()
now check if the input file exists. (#137)factorize_secuTrial() warning messages have been
adjusted to improve trouble shooting experience. (#134, #135)dates_secuTrial() incomplete date warnings are now
concatenated and returned as one warning per form instead of many.
(#124)factorize_secuTrial() can
now handle exports which have the reset option enabled in radio
buttons.write_secuTrial() now allows xpt version 8 files to be
written. (closes #57)check_export_options() function was added. It informs
on deviations from suggested export options. (closes #17)partial_date_string, partial_date_handling,
unknown_date_string).format_info (e.g. “CSV format for MS Excel”) to
export_options.subset_secuTrial() function was added. It allows
subsetting of secuTrialdata based on patient ID and/or study centre
name.get_participants() function was added. It allows easy
extractions of participant info from a secuTrialdata object.return_random_cases() now returns a list. The first
element are the cases and the second element is the output of
RNGkind().diff_secuTrial() added to allow light
weight comparison of the setup of two secuTrial exports.factorize_secuTrial() now no longer triggers an
unexpected warning when the name of a secuTrial lookuptable is equal to
the name of the variable it is being used in. (PR #108)return_random_cases() has been added to the package. It
allows to sample a random subset of cases from a secuTrial export in a
reproducible fashion.read_secuTrial_raw() and read_secuTrial()
no longer fail due to missing Add-ID, centre information or project
setup in export data. Instead, adding of pat_id (no
Add-ID), centre (no centre information) and
visit_name (no project setup) to the data tables is now
omitted if the relevant data for the operation is not available.read_secuTrial_raw() and read_secuTrial()
no longer fail due to missing “Description” in export options.dates_secuTrial() now warns if not all dates were
parsed (expected if there are incomplete dates).factorize_secuTrial() now warns if there are issues
with the factorization (not expected to trigger).build_secuTrial_url() has been added. It
allows users to easily compose URLs to specific secuTrial forms.read_secuTrial_export() has been
changed to read_secuTrial_raw() to avoid confusion with
read_secuTrial().These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.