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A probability tree allows to compute probabilities of complex events, such as genotype probabilities in intermediate generations of inbreeding through recurrent self-fertilization (selfing). This package implements functionality to compute probability trees for two- and three-marker genotypes in the F2 to F7 selfing generations. The conditional probabilities are derived automatically and in symbolic form. The package also provides functionality to extract and evaluate the relevant probabilities.
| Version: | 0.2 |
| Depends: | R (≥ 2.15.1), foreach |
| Published: | 2014-12-18 |
| DOI: | 10.32614/CRAN.package.selfingTree |
| Author: | Frank Technow [aut, cre] (Pioneer Hi-Bred International, Inc., Johnston, Iowa) |
| Maintainer: | Frank Technow <Frank.Technow at pioneer.com> |
| License: | BSD_3_clause + file LICENSE |
| Copyright: | (c) 2014, Pioneer Hi-Bred International, Inc. |
| NeedsCompilation: | no |
| CRAN checks: | selfingTree results |
| Reference manual: | selfingTree.pdf |
| Package source: | selfingTree_0.2.tar.gz |
| Windows binaries: | r-devel: selfingTree_0.2.zip, r-release: selfingTree_0.2.zip, r-oldrel: selfingTree_0.2.zip |
| macOS binaries: | r-release (arm64): selfingTree_0.2.tgz, r-oldrel (arm64): selfingTree_0.2.tgz, r-release (x86_64): selfingTree_0.2.tgz, r-oldrel (x86_64): selfingTree_0.2.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.