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simmr 0.5.1
- Fixed bug introduced in 0.5.0 affecting the prior distribution on
the residual standard deviation
- Added extra argument to simmr_mcmc and simmr_mcmc_tdf to enable more
control on the prior distribution on the residual standard
deviation
simmr 0.5.0
- Implemented new Fixed Form Variational Bayes method for fitting
SIMMs (publication forthcoming)
- Added new GGally matrix plots
simmr 0.4.6
- Implemented vdiffr for better checking of output plots
- Added capture.output to remove verbose testing
- Added feature to allow for >2 sources to combined in
combine_sources
- Added ability to use data in matrix, data frame, or tibble format
without error
- Changed the way prior_viz object is plotted and returned to allow
for greater customisation
- Improved test that to test for bad source mean and sd shapes
- Added a new vignette on advanced plotting (and moved other parts out
of main vignette)
simmr 0.4.5
- Updated new checkmate error checking for multiple functions
- Added new tests for 90%+ code coverage
- Fixed a bug that stopped some plots being outputted correctly
- Fixed some broken examples
simmr 0.4.4
- Updated the simmr_elicit function to provide a more explicit warning
for bad input objects
- Updated compare_sources and compare_groups to allow exporting of the
plot object for editing purposes
- Used styler to correct code style
simmr 0.4.3
- Fixed a bug in combine_sources that stopped it working for multiple
groups
- Added in a load more tests to increase code coverage
- Implemented checkmate for error checking in simmr_load
simmr 0.4.2
- Fixed a bug with the summary function which was always reporting the
same group when an individual group was specified (didn’t apply to
multiple group summaries). Added a test for that bug.
- Updated posterior_predictive to produce some more helpful
output
simmr 0.4.1
- Fixed some major bugs to plot.simmr_output and compare_groups which
caused the wrong groups to be selected
- Fixed a minor dependency bug as no longer using coda
simmr 0.4.0
- Included
prior_viz
to visualise and contrast the prior
and posterior distributions
- Included
posterior_posterior_predictive
to visualise
model fit using bayesplot
- Added
simmr_mcmc_tdf
to estimate trophic discrimination
factors for known diet studies
- Updated
simmr_mcmc
to use R2jags
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.