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sisti: Real-Time PCR Data Sets by Sisti et al. (2010)

This data package contains four datasets of quantitative PCR (qPCR) amplification curves that were used as supplementary data in the research article by Sisti et al. (2010), <doi:10.1186/1471-2105-11-186>. The primary dataset comprises a ten-fold dilution series spanning copy numbers from 3.14 × 10^7 to 3.14 × 10^2, with twelve replicates per concentration. These samples are based on a pGEM-T Promega plasmid containing a 104 bp fragment of the mitochondrial gene NADH dehydrogenase 1 (MT-ND1), amplified using the ND1/ND2 primer pair. The remaining three datasets contain qPCR results in the presence of specific PCR inhibitors: tannic acid, immunoglobulin G (IgG), and quercetin, respectively, to assess their effects on the amplification process. These datasets are useful for researchers interested in PCR kinetics. The original raw data file is available as Additional File 1: <https://static-content.springer.com/esm/art%3A10.1186%2F1471-2105-11-186/MediaObjects/12859_2009_3643_MOESM1_ESM.XLS>.

Version: 0.0.1
Depends: R (≥ 2.10)
Imports: tibble
Published: 2024-04-28
DOI: 10.32614/CRAN.package.sisti
Author: Ramiro Magno ORCID iD [aut, cre], Pattern Institute [cph, fnd]
Maintainer: Ramiro Magno <rmagno at pattern.institute>
BugReports: https://github.com/ramiromagno/sisti/issues
License: CC BY 4.0
URL: https://rmagno.eu/sisti/, https://github.com/ramiromagno/sisti
NeedsCompilation: no
Materials: README NEWS
CRAN checks: sisti results

Documentation:

Reference manual: sisti.pdf

Downloads:

Package source: sisti_0.0.1.tar.gz
Windows binaries: r-devel: sisti_0.0.1.zip, r-release: sisti_0.0.1.zip, r-oldrel: sisti_0.0.1.zip
macOS binaries: r-release (arm64): sisti_0.0.1.tgz, r-oldrel (arm64): sisti_0.0.1.tgz, r-release (x86_64): sisti_0.0.1.tgz, r-oldrel (x86_64): sisti_0.0.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=sisti to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.