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To cite package ‘spAbundance’ in publications, please cite the Doser, Finley, Kéry, Zipkin (2024) paper. If using functions lfMsAbund, sfMsAbund, lfMsNMix, sfMsNMix, lfMsDS, or sfMsDS, please also cite the Doser, Finley, Banerjee (2023) paper that developed much of the code used for these functions.

Doser JW, Finley AO, Kéry M, Zipkin EF (2024). “spAbundance: An R package for univariate and multivariate spatially-explicit abundance models.” Methods in Ecology and Evolution, 15, 1024-1033. https://doi.org/10.1111/2041-210X.14332.

Doser JW, Finley AO, Banerjee S (2023). “Joint species distribution models with imperfect detection for high-dimensional spatial data.” Ecology, e4137. https://doi.org/10.1002/ecy.4137.

Corresponding BibTeX entries:

  @Article{,
    title = {{spAbundance: An R package for univariate and multivariate
      spatially-explicit abundance models}},
    author = {Jeffrey W. Doser and Andrew O. Finley and Marc Kéry and
      Elise F. Zipkin},
    journal = {Methods in Ecology and Evolution},
    year = {2024},
    volume = {15},
    pages = {1024-1033},
    url = {https://doi.org/10.1111/2041-210X.14332},
  }
  @Article{,
    title = {Joint species distribution models with imperfect detection
      for high-dimensional spatial data},
    author = {Jeffrey W. Doser and Andrew O. Finley and Sudipto
      Banerjee},
    journal = {Ecology},
    year = {2023},
    pages = {e4137},
    url = {https://doi.org/10.1002/ecy.4137},
  }

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.