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stability: Stability Analysis of Genotype by Environment Interaction (GEI)

Muhammad Yaseen1,2, and Kent M. Eskridge3

  1. School of Mathematical & Statistical Sciences, Clemson University, Clemson, South Carolina, USA

  2. Department of Mathematics and Statistics, University of Agriculture Faisalabad, Pakistan

  3. Department of Statistics, University of Nebraska Lincoln, NE, USA

minimal R version License: GPL v3 CRAN_Status_Badge rstudio mirror downloads

develVersion

Project Status: WIP lifecycle Last-changedate ***

Description

Functionalities to perform Stability Analysis of Genotype by Environment Interaction (GEI) to identify superior and stable genotypes under diverse environments. It performs Eberhart & Russel’s ANOVA (1966) (<doi:10.2135/cropsci1966.0011183X000600010011x>), Finlay and Wilkinson (1963) Joint Linear Regression (<doi:10.1071/AR9630742>), Wricke (1962, 1964) Ecovalence, Shukla’s stability variance parameter (1972) (<doi:10.1038/hdy.1972.87>) and Kang’s (1991) (<doi:10.2134/agronj1991.00021962008300010037x](https://doi.org/10.2135/cropsci1966.0011183X000600010011x%3E), Finlay and Wilkinson (1963) Joint Linear Regression (doi:10.1071/AR9630742), Wricke (1962, 1964) Ecovalence, Shukla’s stability variance parameter (1972) (doi:10.1038/hdy.1972.87) and Kang’s (1991) (<doi:10.2134/agronj1991.00021962008300010037x)) simultaneous selection for high yielding and stable parameter.

Installation

The package can be installed from CRAN as follows:

install.packages("stability", dependencies = TRUE)

The development version can be installed from github as follows:

if (!require("remotes")) install.packages("remotes")
remotes::install_github("myaseen208/stability")

What’s new

To know whats new in this version type:

news(package = "stability")

CRAN page

Github page

Documentation website

Citing stability

To cite the methods in the package use:

citation("stability")
To cite package 'stability' in publications use:

  Muhammad Yaseen, Kent M. Eskridge, Ghulam Murtaza (2018). _stability:
  Stability Analysis of Genotype by Environment Interaction (GEI)_. R
  package version 0.5.0,
  <https://CRAN.R-project.org/package=stability>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {stability: Stability Analysis of Genotype by Environment Interaction (GEI)},
    author = {{Muhammad Yaseen} and {Kent M. Eskridge} and {Ghulam Murtaza}},
    year = {2018},
    note = {R package version 0.5.0},
    url = {https://CRAN.R-project.org/package=stability},
  }

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.